RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 MYOZ1Q9NP98 299 aaPredicted RBP15.49■□□□□ 0.07
PHRF1-202ENST00000413872 CT62P0C5K7 136 aa15.49■□□□□ 0.07
PHRF1-202ENST00000413872 NAA40Q86UY6 237 aa15.49■□□□□ 0.07
PHRF1-202ENST00000413872 OR13C5Q8NGS8 318 aa15.49■□□□□ 0.07
PHRF1-202ENST00000413872 LRRC3BQ96PB8 259 aa15.49■□□□□ 0.07
PHRF1-202ENST00000413872 ADAT1Q9BUB4 502 aaKnown RBP15.49■□□□□ 0.07
PHRF1-202ENST00000413872 CHST6Q9GZX3 395 aa15.49■□□□□ 0.07
PHRF1-202ENST00000413872 ARV1Q9H2C2 271 aa15.49■□□□□ 0.07
PHRF1-202ENST00000413872 TAF1LQ8IZX4 1826 aa15.49■□□□□ 0.07
PHRF1-202ENST00000413872 TMIGD3P0DMS9 266 aaPredicted RBP15.49■□□□□ 0.07
PHRF1-202ENST00000413872 POU4F3Q15319 338 aa15.49■□□□□ 0.07
PHRF1-202ENST00000413872 SUMF1Q8NBK3 374 aa15.49■□□□□ 0.07
PHRF1-202ENST00000413872 CIB3Q96Q77 187 aaPredicted RBP15.49■□□□□ 0.07
PHRF1-202ENST00000413872 SEC22CQ9BRL7 303 aa15.49■□□□□ 0.07
PHRF1-202ENST00000413872 COPS3Q9UNS2 423 aa15.49■□□□□ 0.07
PHRF1-202ENST00000413872 BRWD3Q6RI45 1802 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 COL4A1P02462 1669 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 MDFIC2A0A1B0GVS7 189 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 RPA2P15927 270 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 TMEM217Q8N7C4 229 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 TAAR6Q96RI8 345 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 COMMD5Q9GZQ3 224 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 ISG20L2Q9H9L3 353 aaKnown RBP15.48■□□□□ 0.07
PHRF1-202ENST00000413872 FSCN3Q9NQT6 498 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 GIPP09681 153 aaPredicted RBP15.48■□□□□ 0.07
PHRF1-202ENST00000413872 AVPR2P30518 371 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 NKX6-1P78426 367 aaPredicted RBP15.48■□□□□ 0.07
PHRF1-202ENST00000413872 MOB1BQ7L9L4 216 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 SLC30A7Q8NEW0 376 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 VSTM2LQ96N03 204 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 TMEM30CPA0ZSE6 113 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 AQP7P3A6NL99 342 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 FUT3P21217 361 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 BMP5P22003 454 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 GALMQ96C23 342 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 OPRM1P35372 400 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 ERHP84090 104 aaKnown RBP15.48■□□□□ 0.07
PHRF1-202ENST00000413872 DGCR2P98153 550 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 COL13A1Q5TAT6 717 aaPredicted RBP15.48■□□□□ 0.07
PHRF1-202ENST00000413872 OR2W3Q7Z3T1 314 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 SVBPQ8N300 66 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 OR6X1Q8NH79 312 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 MCHR2Q969V1 340 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 YIPF6Q96EC8 236 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 DOK1Q99704 481 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 SLC17A5Q9NRA2 495 aa15.48■□□□□ 0.07
PHRF1-202ENST00000413872 TAAR5O14804 337 aa15.47■□□□□ 0.07
PHRF1-202ENST00000413872 EPPINO95925 133 aa15.47■□□□□ 0.07
PHRF1-202ENST00000413872 DYNC2LI1Q8TCX1 351 aa15.47■□□□□ 0.07
PHRF1-202ENST00000413872 TRPM6Q9BX84 2022 aa15.47■□□□□ 0.07
PHRF1-202ENST00000413872 PLPP3O14495 311 aa15.47■□□□□ 0.07
PHRF1-202ENST00000413872 EPXP11678 715 aa15.47■□□□□ 0.07
PHRF1-202ENST00000413872 FCGR2CP31995 323 aa15.47■□□□□ 0.07
PHRF1-202ENST00000413872 PELI1Q96FA3 418 aa15.47■□□□□ 0.07
PHRF1-202ENST00000413872 UQCC2Q9BRT2 126 aa15.47■□□□□ 0.07
PHRF1-202ENST00000413872 IGHV3-64DA0A0J9YX35 117 aa15.47■□□□□ 0.07
PHRF1-202ENST00000413872 STARD6P59095 220 aa15.47■□□□□ 0.07
PHRF1-202ENST00000413872 PPP1R3CQ9UQK1 317 aa15.47■□□□□ 0.07
PHRF1-202ENST00000413872 AMDHD2Q9Y303 409 aa15.47■□□□□ 0.07
PHRF1-202ENST00000413872 PRICKLE3O43900 615 aaPredicted RBP15.47■□□□□ 0.07
PHRF1-202ENST00000413872 HPNP05981 417 aa15.47■□□□□ 0.07
PHRF1-202ENST00000413872 EPHA2P29317 976 aa15.47■□□□□ 0.07
PHRF1-202ENST00000413872 LFNGQ8NES3 379 aa15.47■□□□□ 0.07
PHRF1-202ENST00000413872 NUDCD2Q8WVJ2 157 aa15.47■□□□□ 0.07
PHRF1-202ENST00000413872 GDF15Q99988 308 aa15.47■□□□□ 0.07
PHRF1-202ENST00000413872 SPRY3O43610 288 aa15.46■□□□□ 0.07
PHRF1-202ENST00000413872 DHRS3O75911 302 aa15.46■□□□□ 0.07
PHRF1-202ENST00000413872 SOX18P35713 384 aa15.46■□□□□ 0.07
PHRF1-202ENST00000413872 ZNF83P51522 516 aa15.46■□□□□ 0.07
PHRF1-202ENST00000413872 MICBQ29980 383 aa15.46■□□□□ 0.07
PHRF1-202ENST00000413872 HSD17B11Q8NBQ5 300 aa15.46■□□□□ 0.07
PHRF1-202ENST00000413872 C20orf141Q9NUB4 165 aa15.46■□□□□ 0.07
PHRF1-202ENST00000413872 TMEFF2Q9UIK5 374 aaPredicted RBP15.46■□□□□ 0.07
PHRF1-202ENST00000413872 TCRBV16S1A1N1A0A5B0 115 aa15.46■□□□□ 0.07
PHRF1-202ENST00000413872 RPS16P62249 146 aaKnown RBP15.46■□□□□ 0.07
PHRF1-202ENST00000413872 OR8G2PQ6IF36 304 aa15.46■□□□□ 0.07
PHRF1-202ENST00000413872 XRCC3O43542 346 aa15.46■□□□□ 0.07
PHRF1-202ENST00000413872 GNB3P16520 340 aa15.46■□□□□ 0.07
PHRF1-202ENST00000413872 MN1Q10571 1320 aaPredicted RBP15.46■□□□□ 0.07
PHRF1-202ENST00000413872 A0A1W2PPV9 198 aa15.46■□□□□ 0.06
PHRF1-202ENST00000413872 LGALS8O00214 317 aa15.46■□□□□ 0.06
PHRF1-202ENST00000413872 HLA-DOBP13765 273 aa15.46■□□□□ 0.06
PHRF1-202ENST00000413872 ZNF32P17041 273 aa15.46■□□□□ 0.06
PHRF1-202ENST00000413872 SOX8P57073 446 aa15.46■□□□□ 0.06
PHRF1-202ENST00000413872 SPATA46Q5T0L3 261 aa15.46■□□□□ 0.06
PHRF1-202ENST00000413872 RNF167Q9H6Y7 350 aa15.46■□□□□ 0.06
PHRF1-202ENST00000413872 BIN3Q9NQY0 253 aa15.46■□□□□ 0.06
PHRF1-202ENST00000413872 OR2M5A3KFT3 312 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 CYR61O00622 381 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 PSMB3P49720 205 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 ARL16Q0P5N6 197 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 PABPC1L2AQ5JQF8 200 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 TRAT1Q6PIZ9 186 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 ALKAL2Q6UX46 152 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 BTLAQ7Z6A9 289 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 CELF2-AS1Q8N7Q2 184 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 OR2Z1Q8NG97 314 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 TSPAN32Q96QS1 320 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 SARGQ9BW04 601 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 RPH3ALQ9UNE2 315 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms