RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ADAM10O14672 748 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 CST4P01036 141 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 GAPDHP04406 335 aaKnown RBP15.61■□□□□ 0.09
SDCBP-202ENST00000413219 SMIM6P0DI80 62 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 RPS2P15880 293 aaKnown RBP15.61■□□□□ 0.09
SDCBP-202ENST00000413219 OR1D4P47884 311 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 DVL1P1P54792 670 aaPredicted RBP15.61■□□□□ 0.09
SDCBP-202ENST00000413219 F2RL1P55085 397 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 TMEM50BP56557 158 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 TAS2R46P59540 309 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 ECH1Q13011 328 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 SURF2Q15527 256 aaPredicted RBP15.61■□□□□ 0.09
SDCBP-202ENST00000413219 FAM76BQ5HYJ3 339 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 TMEM268Q5VZI3 342 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 FAM109BQ6ICB4 259 aaPredicted RBP15.61■□□□□ 0.09
SDCBP-202ENST00000413219 TTLL10Q6ZVT0 673 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 WDFY1Q8IWB7 410 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 TMEM104Q8NE00 496 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 OR10S1Q8NGN2 331 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 OR1N1Q8NGS0 311 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 OR13G1Q8NGZ3 307 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 FANCFQ9NPI8 374 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.61■□□□□ 0.09
SDCBP-202ENST00000413219 EIF3GO75821 320 aaKnown RBP eCLIP15.61■□□□□ 0.09
SDCBP-202ENST00000413219 AMY2BP19961 511 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 PTAFRP25105 342 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 PTGFRP43088 359 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 HSD11B2P80365 405 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 POU3F1Q03052 451 aaPredicted RBP15.61■□□□□ 0.09
SDCBP-202ENST00000413219 HABP2Q14520 560 aaPredicted RBP15.61■□□□□ 0.09
SDCBP-202ENST00000413219 RNF212Q495C1 297 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 AADACL3Q5VUY0 350 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 RPL7L1Q6DKI1 246 aaKnown RBP15.61■□□□□ 0.09
SDCBP-202ENST00000413219 OR51F2Q8NH61 342 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 OR51E1Q8TCB6 317 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 URM1Q9BTM9 101 aaKnown RBP15.61■□□□□ 0.09
SDCBP-202ENST00000413219 CERS4Q9HA82 394 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 KPTNQ9Y664 436 aa15.61■□□□□ 0.09
SDCBP-202ENST00000413219 ANKUB1A6NFN9 424 aa15.6■□□□□ 0.09
SDCBP-202ENST00000413219 FAM157AC9JC47 383 aa15.6■□□□□ 0.09
SDCBP-202ENST00000413219 RAD51DO75771 328 aa15.6■□□□□ 0.09
SDCBP-202ENST00000413219 ACAA1P09110 424 aaPredicted RBP15.6■□□□□ 0.09
SDCBP-202ENST00000413219 ATXN8OSP0DMR3 200 aa15.6■□□□□ 0.09
SDCBP-202ENST00000413219 HKR1P10072 659 aa15.6■□□□□ 0.09
SDCBP-202ENST00000413219 BCKDHBP21953 392 aa15.6■□□□□ 0.09
SDCBP-202ENST00000413219 APOBEC1P41238 236 aaKnown RBP15.6■□□□□ 0.09
SDCBP-202ENST00000413219 TLE3Q04726 772 aa15.6■□□□□ 0.09
SDCBP-202ENST00000413219 C9orf50Q5SZB4 431 aa15.6■□□□□ 0.09
SDCBP-202ENST00000413219 TMPRSS9Q7Z410 1059 aa15.6■□□□□ 0.09
SDCBP-202ENST00000413219 LURAP1LQ8IV03 231 aa15.6■□□□□ 0.09
SDCBP-202ENST00000413219 ZFP82Q8N141 532 aa15.6■□□□□ 0.09
SDCBP-202ENST00000413219 LYPD6BQ8NI32 183 aa15.6■□□□□ 0.09
SDCBP-202ENST00000413219 EMG1Q92979 244 aaKnown RBP15.6■□□□□ 0.09
SDCBP-202ENST00000413219 TGM7Q96PF1 710 aa15.6■□□□□ 0.09
SDCBP-202ENST00000413219 SULT4A1Q9BR01 284 aa15.6■□□□□ 0.09
SDCBP-202ENST00000413219 TIMM10BQ9Y5J6 103 aa15.6■□□□□ 0.09
SDCBP-202ENST00000413219 CHD9Q3L8U1 2897 aa15.6■□□□□ 0.09
SDCBP-202ENST00000413219 C1orf196B1AJZ1 125 aa15.59■□□□□ 0.09
SDCBP-202ENST00000413219 LAP3P28838 519 aa15.59■□□□□ 0.09
SDCBP-202ENST00000413219 OR3A2P47893 321 aa15.59■□□□□ 0.09
SDCBP-202ENST00000413219 P2RY4P51582 365 aa15.59■□□□□ 0.09
SDCBP-202ENST00000413219 GFERP55789 205 aa15.59■□□□□ 0.09
SDCBP-202ENST00000413219 EIF3IQ13347 325 aaKnown RBP15.59■□□□□ 0.09
SDCBP-202ENST00000413219 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.59■□□□□ 0.09
SDCBP-202ENST00000413219 KIRREL1Q96J84 757 aa15.59■□□□□ 0.09
SDCBP-202ENST00000413219 MED29Q9NX70 200 aa15.59■□□□□ 0.09
SDCBP-202ENST00000413219 ZMAT5Q9UDW3 170 aaKnown RBP15.59■□□□□ 0.09
SDCBP-202ENST00000413219 LHX6Q9UPM6 363 aa15.59■□□□□ 0.09
SDCBP-202ENST00000413219 B3GALT5Q9Y2C3 310 aa15.59■□□□□ 0.09
SDCBP-202ENST00000413219 C5orf42Q9H799 3197 aa15.59■□□□□ 0.09
SDCBP-202ENST00000413219 ZNF878C9JN71 531 aa15.59■□□□□ 0.09
SDCBP-202ENST00000413219 H3BMH7 237 aa15.59■□□□□ 0.09
SDCBP-202ENST00000413219 ZNF354AO60765 605 aaPredicted RBP15.59■□□□□ 0.09
SDCBP-202ENST00000413219 NME2P22392 152 aa15.59■□□□□ 0.09
SDCBP-202ENST00000413219 SUMO3P55854 103 aaPredicted RBP15.59■□□□□ 0.09
SDCBP-202ENST00000413219 FAM89BQ8N5H3 189 aa15.59■□□□□ 0.09
SDCBP-202ENST00000413219 SLC39A7Q92504 469 aa15.59■□□□□ 0.09
SDCBP-202ENST00000413219 ARHGAP5-AS1Q96IT6 56 aa15.59■□□□□ 0.09
SDCBP-202ENST00000413219 ARL5BQ96KC2 179 aa15.59■□□□□ 0.09
SDCBP-202ENST00000413219 CACFD1Q9UGQ2 172 aa15.59■□□□□ 0.09
SDCBP-202ENST00000413219 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.58■□□□□ 0.09
SDCBP-202ENST00000413219 A0A1W2PNV4 684 aa15.58■□□□□ 0.09
SDCBP-202ENST00000413219 JTBO76095 146 aa15.58■□□□□ 0.09
SDCBP-202ENST00000413219 PI3P19957 117 aa15.58■□□□□ 0.09
SDCBP-202ENST00000413219 OR3A4PP47883 348 aa15.58■□□□□ 0.09
SDCBP-202ENST00000413219 EFNA3P52797 238 aa15.58■□□□□ 0.09
SDCBP-202ENST00000413219 S100A10P60903 97 aa15.58■□□□□ 0.09
SDCBP-202ENST00000413219 ARFRP1Q13795 201 aa15.58■□□□□ 0.09
SDCBP-202ENST00000413219 NSDHLQ15738 373 aa15.58■□□□□ 0.09
SDCBP-202ENST00000413219 DHRS11Q6UWP2 260 aa15.58■□□□□ 0.09
SDCBP-202ENST00000413219 DDIT4LQ96D03 193 aa15.58■□□□□ 0.09
SDCBP-202ENST00000413219 KLHDC7BQ96G42 594 aa15.58■□□□□ 0.09
SDCBP-202ENST00000413219 CRB3Q9BUF7 120 aa15.58■□□□□ 0.09
SDCBP-202ENST00000413219 CNTNAP3Q9BZ76 1288 aa15.58■□□□□ 0.09
SDCBP-202ENST00000413219 C1orf123Q9NWV4 160 aa15.58■□□□□ 0.09
SDCBP-202ENST00000413219 PRR13Q9NZ81 148 aa15.58■□□□□ 0.09
SDCBP-202ENST00000413219 MKI67P46013 3256 aaKnown RBP15.58■□□□□ 0.08
SDCBP-202ENST00000413219 C5orf52A6NGY3 159 aa15.58■□□□□ 0.08
SDCBP-202ENST00000413219 UBE2CO00762 179 aa15.58■□□□□ 0.08
SDCBP-202ENST00000413219 LINC01565O15544 149 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms