RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 BACE1P56817 501 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 CDK5Q00535 292 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 EBPQ15125 230 aaKnown RBP4.66□□□□□ -1.66
HERC4-205ENST00000412272 LY6G6FQ5SQ64 297 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 PET117Q6UWS5 81 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 Q6ZVU0 165 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 C9orf40Q8IXQ3 194 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 OR8I2Q8N0Y5 310 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 DAZLQ92904 295 aaKnown RBP4.66□□□□□ -1.66
HERC4-205ENST00000412272 ZBTB45Q96K62 511 aaPredicted RBP4.66□□□□□ -1.66
HERC4-205ENST00000412272 ZNF582Q96NG8 517 aaPredicted RBP4.66□□□□□ -1.66
HERC4-205ENST00000412272 ZDHHC6Q9H6R6 413 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 MED20Q9H944 212 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 KIF26AQ9ULI4 1882 aaPredicted RBP4.66□□□□□ -1.66
HERC4-205ENST00000412272 SLC38A8A6NNN8 435 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 RNF212BA8MTL3 300 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 GABARAPH6UMI1 98 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 PCDH7O60245 1069 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 ZNF205O95201 554 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 SYNGR4O95473 234 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 LIMS3P0CW19 117 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 LIMS4P0CW20 117 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 S100GP29377 79 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 CCKARP32238 428 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 SSTR5P35346 364 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 PGFP49763 221 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 GGTA1PQ4G0N0 100 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 C4orf17Q53FE4 359 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 SYT14P1Q58G82 188 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 CARD17Q5XLA6 110 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 FAM71F2Q6NXP2 309 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 UNQ6126/PRO20091Q6UXV3 157 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 TMEM130Q8N3G9 435 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 NPWQ8N729 165 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 FRMD1Q8N878 549 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 OR2T27Q8NH04 317 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 OR52I2Q8NH67 350 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 C15orf40Q8WUR7 153 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 EEF1AKMT1Q8WVE0 214 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 MRAP2Q96G30 205 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 CD180Q99467 661 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 PKIBQ9C010 78 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 SLC39A8Q9C0K1 460 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 GTSF1LQ9H1H1 148 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 A0A087WWC5 75 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 A0A1W2PRS3 328 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 ZNF727A8MUV8 499 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 TMPRSS11DO60235 418 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 SMIM10L1P0DMW3 83 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 GNB3P16520 340 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 TNFSF9P41273 254 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 PAFAH1B2P68402 229 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 EXT1Q16394 746 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 CEACAM21Q3KPI0 293 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 ZNF658BQ4V348 819 aaPredicted RBP4.66□□□□□ -1.66
HERC4-205ENST00000412272 SFXN4Q6P4A7 337 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 DOK6Q6PKX4 331 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 FRRS1Q6ZNA5 592 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 MTSS1LQ765P7 747 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 ADCK2Q7Z695 626 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 TMED4Q7Z7H5 227 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 KLHDC8AQ8IYD2 350 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 LINC00471Q8N535 108 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 FER1L6-AS1Q8NA97 138 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 KREMEN2Q8NCW0 462 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 NPEPL1Q8NDH3 523 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 TMED6Q8WW62 240 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 GEMIN6Q8WXD5 167 aaKnown RBP4.66□□□□□ -1.66
HERC4-205ENST00000412272 FAM3CQ92520 227 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 WBP2Q969T9 261 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 SMIM10Q96HG1 83 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 TMEM169Q96HH4 297 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 TBX15Q96SF7 602 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 SIGMAR1Q99720 223 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 RERGLQ9H628 205 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 CYTL1Q9NRR1 136 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 GPR27Q9NS67 375 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 TBX21Q9UL17 535 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 SLC7A7Q9UM01 511 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 STRAPQ9Y3F4 350 aaKnown RBP4.66□□□□□ -1.66
HERC4-205ENST00000412272 ETV2O00321 342 aaPredicted RBP4.65□□□□□ -1.66
HERC4-205ENST00000412272 HCRTO43612 131 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 FCMRO60667 390 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 RAMP1O60894 148 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 DIRAS1O95057 198 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 SLC35A1P78382 337 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 ARTNQ5T4W7 220 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 DCAF8Q5TAQ9 597 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 MARCH9Q86YJ5 346 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 C5orf17Q8NAS9 161 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 OR51L1Q8NGJ5 315 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 OR10Q1Q8NGQ4 319 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 RAX2Q96IS3 184 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 MICU1Q9BPX6 476 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 COPS7AQ9UBW8 275 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 YBX2Q9Y2T7 364 aaKnown RBP4.65□□□□□ -1.66
HERC4-205ENST00000412272 SRCAPQ6ZRS2 3230 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 B4DGG1 531 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 K7EQM0 130 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 SLC33A1O00400 549 aaPredicted RBP4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms