RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 PITPNBP48739 271 aa10.94□□□□□ -0.66
CHRNA1-205ENST00000409542 NANOGNBQ7Z5D8 188 aa10.94□□□□□ -0.66
CHRNA1-205ENST00000409542 C17orf78Q8N4C9 275 aa10.94□□□□□ -0.66
CHRNA1-205ENST00000409542 ZIC4Q8N9L1 334 aa10.94□□□□□ -0.66
CHRNA1-205ENST00000409542 C1orf162Q8NEQ5 155 aaPredicted RBP10.94□□□□□ -0.66
CHRNA1-205ENST00000409542 OR4M2Q8NGB6 313 aa10.94□□□□□ -0.66
CHRNA1-205ENST00000409542 OR6K6Q8NGW6 343 aa10.94□□□□□ -0.66
CHRNA1-205ENST00000409542 ZNF563Q8TA94 476 aa10.94□□□□□ -0.66
CHRNA1-205ENST00000409542 SLC25A43Q8WUT9 341 aaPredicted RBP10.94□□□□□ -0.66
CHRNA1-205ENST00000409542 TRIM63Q969Q1 353 aa10.94□□□□□ -0.66
CHRNA1-205ENST00000409542 RFT1Q96AA3 541 aa10.94□□□□□ -0.66
CHRNA1-205ENST00000409542 WACQ9BTA9 647 aa10.94□□□□□ -0.66
CHRNA1-205ENST00000409542 MARCH7Q9H992 704 aa10.94□□□□□ -0.66
CHRNA1-205ENST00000409542 SEC61A2Q9H9S3 476 aa10.94□□□□□ -0.66
CHRNA1-205ENST00000409542 ACOXLQ9NUZ1 547 aa10.94□□□□□ -0.66
CHRNA1-205ENST00000409542 TRAV36DV7A0A075B6V5 113 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 A0A0B4J293 547 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 FAM240BA0A1B0GVZ2 78 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 BLOC1S5-TXNDC5H3BN57 136 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 PDCD5O14737 125 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 SLC43A1O75387 559 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 BGLAPP02818 100 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 HIST1H2ABP04908 130 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 TACSTD2P09758 323 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 SRP14P37108 136 aaKnown RBP10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 SNRPD2P62316 118 aaKnown RBP10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 RPL18Q07020 188 aaKnown RBP10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 MADCAM1Q13477 382 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 SLC17A1Q14916 467 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 ADIPOQQ15848 244 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 TBRG1Q3YBR2 411 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 HSD17B12Q53GQ0 312 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 CEP78Q5JTW2 689 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 VHLLQ6RSH7 139 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 HIST3H2AQ7L7L0 130 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 OR13C5Q8NGS8 318 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 OR2T4Q8NH00 348 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 TMEM234Q8WY98 164 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 HIST1H2ACQ93077 130 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 MARVELD1Q9BSK0 173 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 RPRD1BQ9NQG5 326 aaKnown RBP10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 CA10Q9NS85 328 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 HDGFL3Q9Y3E1 203 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 N6AMT1Q9Y5N5 214 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 TMEM72A0PK05 275 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 RGS13O14921 159 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 ORC5O43913 435 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 FZD7O75084 574 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 RENP00797 406 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 MT-ATP6P00846 226 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 MPGP29372 298 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 CALCRP30988 508 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 BTG1P62324 171 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 PITPNAQ00169 270 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 ZFP69Q49AA0 526 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 YIF1BQ5BJH7 314 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 FAM220AQ7Z4H9 259 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 TIGD4Q8IY51 512 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 SEMA6DQ8NFY4 1073 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 TAAR8Q969N4 342 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 RNF166Q96A37 237 aaPredicted RBP10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 CREB3L1Q96BA8 519 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 KTI12Q96EK9 354 aaPredicted RBP10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 ZNF385AQ96PM9 386 aaKnown RBP10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 TSPAN32Q96QS1 320 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 THAP7Q9BT49 309 aaPredicted RBP10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 TTTY10Q9BZA0 68 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 HDHD2Q9H0R4 259 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 PLK3Q9H4B4 646 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 MYOZ1Q9NP98 299 aaPredicted RBP10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 GRHPRQ9UBQ7 328 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 ZNF281Q9Y2X9 895 aa10.93□□□□□ -0.66
CHRNA1-205ENST00000409542 ARPC4-TTLL3A0A0A6YYG9 625 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 B9A039 149 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 LYNX1G3V0Z9 82 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 PHYHO14832 338 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 MAGEB4O15481 346 aaPredicted RBP10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 DNPH1O43598 174 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 UBL3O95164 117 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 WNT11O96014 354 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 OR4A8P0C604 315 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 LYNX1P0DP58 116 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 PSKH1P11801 424 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 DAOP14920 347 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 ATF1P18846 271 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 AHCYP23526 432 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 CXCR1P25024 350 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 GIFP27352 417 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 IDH3GP51553 393 aaPredicted RBP10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 GPR176Q14439 515 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 MESTQ5EB52 335 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 ZNF57Q68EA5 555 aaPredicted RBP10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 LINGO2Q7L985 606 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 GRINAQ7Z429 371 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 MYPOPQ86VE0 399 aaPredicted RBP10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 LINC01356Q8N9X3 169 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 MRI1Q9BV20 369 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 DDX28Q9NUL7 540 aaKnown RBP10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 SPATA2Q9UM82 520 aa10.92□□□□□ -0.66
CHRNA1-205ENST00000409542 ALG5Q9Y673 324 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms