RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 FOXJ2Q9P0K8 574 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 MBD2Q9UBB5 411 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 KLK13Q9UKR3 277 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 LOC400499M0QZD8 3231 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 A0A087WZY1 265 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 NTF4P34130 210 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 B3GALT5-AS1P59052 145 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 SLC22A6Q4U2R8 563 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 FAM57BQ71RH2 274 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 LRRC18Q8N456 261 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 ZIC4Q8N9L1 334 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 ESRP2Q9H6T0 727 aaKnown RBP13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 NPDC1Q9NQX5 325 aaPredicted RBP13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 SLC17A5Q9NRA2 495 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 PADI1Q9ULC6 663 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 TTC28Q96AY4 2481 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 PINLYPA6NC86 204 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 OR5H15A6NDH6 313 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 LRRC3CA6NJW4 275 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 L7N2F9 121 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 SMAD9O15198 467 aaKnown RBP13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 CSF1P09603 554 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 SP9P0CG40 484 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 CSNK1A1P48729 337 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 TAF13Q15543 124 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 C2orf68Q2NKX9 166 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 DBX2Q6ZNG2 339 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 TMEM123Q8N131 208 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 OR9K2Q8NGE7 335 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 OR6N1Q8NGY5 312 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 C15orf40Q8WUR7 153 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 NABP1Q96AH0 204 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 TINAGL1Q9GZM7 467 aaPredicted RBP13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 CHST6Q9GZX3 395 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 DNTTIP1Q9H147 329 aa13.38□□□□□ -0.27
SCAMP4-202ENST00000409472 LOC102725191A0A1B0GVB3 256 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 C9orf172C9J069 976 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 STARP49675 285 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 ENDOGQ14249 297 aaKnown RBP13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 ATRAIDQ6UW56 229 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 OR5AS1Q8N127 324 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 NKAIN3Q8N8D7 197 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 OR4S1Q8NGB4 309 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 COQ8AQ8NI60 647 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 LRRC46Q96FV0 321 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 NKX6-2Q9C056 277 aaPredicted RBP13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 FBXO4Q9UKT5 387 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 MYO7BQ6PIF6 2116 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 FAM74A7A6NL05 159 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 M0R296 226 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 VSIG8P0DPA2 414 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 QRFPP83859 136 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 DHODHQ02127 395 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 SWI5Q1ZZU3 235 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 FAM74A3Q4VXF1 159 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 METTL11BQ5VVY1 283 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 ZNF529Q6P280 563 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 C6orf15Q6UXA7 325 aaPredicted RBP13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 GABRG1Q8N1C3 465 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 BEST3Q8N1M1 668 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 ARMC10Q8N2F6 343 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 LIN37Q96GY3 246 aaPredicted RBP13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 UTP23Q9BRU9 249 aaKnown RBP13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 NICN1Q9BSH3 213 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 DCAF16Q9NXF7 216 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 PIPOXQ9P0Z9 390 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 MGAT4CQ9UBM8 478 aa13.37□□□□□ -0.27
SCAMP4-202ENST00000409472 A0A1W2PP11 408 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 MEGF11A6BM72 1044 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 NPIPA2E9PIF3 369 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 NPIPA3F8WFD2 350 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 RAB27BO00194 218 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 RLN1P04808 185 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 DBHP09172 617 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 CALCRP30988 508 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 DEFA5Q01523 94 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 OC90Q02509 493 aaPredicted RBP13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 KCNMB1Q16558 191 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 ZNF626Q68DY1 528 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 STEAP1BQ6NZ63 245 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 PLXDC2Q6UX71 529 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 PDZD9Q8IXQ8 264 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 ZNF283Q8N7M2 679 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 TMEM54Q969K7 222 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 SGK3Q96BR1 496 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 TMEM41AQ96HV5 264 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 LYZL4Q96KX0 146 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 TMEM138Q9NPI0 162 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 P4HTMQ9NXG6 502 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 PRAF2O60831 178 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 CBR3O75828 277 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 SIX6O95475 246 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 AKAIN1P0CW23 69 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 SMIM6P0DI80 62 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 RFC3P40938 356 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 OR3A4PP47883 348 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 RBMS2Q15434 407 aaKnown RBP13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 ACER2Q5QJU3 275 aa13.36□□□□□ -0.27
SCAMP4-202ENST00000409472 SLC36A1Q7Z2H8 476 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms