RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 NUFIP1Q9UHK0 495 aaKnown RBP17.73■□□□□ 0.43
C4orf48-201ENST00000409248 OR52A1Q9UKL2 312 aa17.73■□□□□ 0.43
C4orf48-201ENST00000409248 TIMM8AO60220 97 aaPredicted RBP17.72■□□□□ 0.43
C4orf48-201ENST00000409248 MRPS14O60783 128 aaKnown RBP17.72■□□□□ 0.43
C4orf48-201ENST00000409248 PNPP00491 289 aa17.72■□□□□ 0.43
C4orf48-201ENST00000409248 CFL1P23528 166 aaKnown RBP17.72■□□□□ 0.43
C4orf48-201ENST00000409248 CHN2P52757 468 aa17.72■□□□□ 0.43
C4orf48-201ENST00000409248 KCTD21Q4G0X4 260 aa17.72■□□□□ 0.43
C4orf48-201ENST00000409248 GLYATL3Q5SZD4 288 aa17.72■□□□□ 0.43
C4orf48-201ENST00000409248 MRPL21Q7Z2W9 205 aaKnown RBP17.72■□□□□ 0.43
C4orf48-201ENST00000409248 OPA3Q9H6K4 179 aa17.72■□□□□ 0.43
C4orf48-201ENST00000409248 NKIRAS2Q9NYR9 191 aa17.72■□□□□ 0.43
C4orf48-201ENST00000409248 VPS13CQ709C8 3753 aa17.72■□□□□ 0.43
C4orf48-201ENST00000409248 ZNF81P51508 661 aa17.71■□□□□ 0.43
C4orf48-201ENST00000409248 WNT4P56705 351 aa17.71■□□□□ 0.43
C4orf48-201ENST00000409248 IRF3Q14653 427 aa17.71■□□□□ 0.43
C4orf48-201ENST00000409248 GFOD2Q3B7J2 385 aa17.71■□□□□ 0.43
C4orf48-201ENST00000409248 CLEC9AQ6UXN8 241 aa17.71■□□□□ 0.43
C4orf48-201ENST00000409248 FBXW12Q6X9E4 464 aa17.71■□□□□ 0.43
C4orf48-201ENST00000409248 PGAP1Q75T13 922 aa17.71■□□□□ 0.43
C4orf48-201ENST00000409248 CATSPERDQ86XM0 798 aa17.71■□□□□ 0.43
C4orf48-201ENST00000409248 NANOGP1Q8N7R0 232 aa17.71■□□□□ 0.43
C4orf48-201ENST00000409248 OR2AE1Q8NHA4 323 aa17.71■□□□□ 0.43
C4orf48-201ENST00000409248 GATAD2BQ8WXI9 593 aa17.71■□□□□ 0.43
C4orf48-201ENST00000409248 CMBLQ96DG6 245 aa17.71■□□□□ 0.43
C4orf48-201ENST00000409248 REEP6Q96HR9 211 aa17.71■□□□□ 0.43
C4orf48-201ENST00000409248 TRIM36Q9NQ86 728 aa17.71■□□□□ 0.43
C4orf48-201ENST00000409248 G6PC2Q9NQR9 355 aa17.71■□□□□ 0.43
C4orf48-201ENST00000409248 ZNF391Q9UJN7 358 aa17.71■□□□□ 0.43
C4orf48-201ENST00000409248 CR1P17927 2039 aa17.71■□□□□ 0.42
C4orf48-201ENST00000409248 ZNF469Q96JG9 3925 aaPredicted RBP17.7■□□□□ 0.42
C4orf48-201ENST00000409248 C5orf63A6NC05 138 aa17.7■□□□□ 0.42
C4orf48-201ENST00000409248 TNFAIP8O95379 198 aa17.7■□□□□ 0.42
C4orf48-201ENST00000409248 RAC2P15153 192 aa17.7■□□□□ 0.42
C4orf48-201ENST00000409248 ANOS1P23352 680 aa17.7■□□□□ 0.42
C4orf48-201ENST00000409248 MRPS11P82912 194 aaKnown RBP17.7■□□□□ 0.42
C4orf48-201ENST00000409248 GK2Q14410 553 aaPredicted RBP17.7■□□□□ 0.42
C4orf48-201ENST00000409248 HLXQ14774 488 aaPredicted RBP17.7■□□□□ 0.42
C4orf48-201ENST00000409248 WDR38Q5JTN6 314 aa17.7■□□□□ 0.42
C4orf48-201ENST00000409248 FDX2Q6P4F2 183 aa17.7■□□□□ 0.42
C4orf48-201ENST00000409248 COMMD2Q86X83 199 aa17.7■□□□□ 0.42
C4orf48-201ENST00000409248 KLBQ86Z14 1044 aa17.7■□□□□ 0.42
C4orf48-201ENST00000409248 ELMOD2Q8IZ81 293 aa17.7■□□□□ 0.42
C4orf48-201ENST00000409248 OR2G2Q8NGZ5 317 aa17.7■□□□□ 0.42
C4orf48-201ENST00000409248 SPSB4Q96A44 273 aa17.7■□□□□ 0.42
C4orf48-201ENST00000409248 BABAM2Q9NXR7 383 aa17.7■□□□□ 0.42
C4orf48-201ENST00000409248 ZNF319Q9P2F9 582 aa17.7■□□□□ 0.42
C4orf48-201ENST00000409248 PURGQ9UJV8 347 aaKnown RBP17.7■□□□□ 0.42
C4orf48-201ENST00000409248 A0A0U1RQV5 110 aa17.69■□□□□ 0.42
C4orf48-201ENST00000409248 HEXAP06865 529 aa17.69■□□□□ 0.42
C4orf48-201ENST00000409248 SELEP16581 610 aa17.69■□□□□ 0.42
C4orf48-201ENST00000409248 KITLGP21583 273 aa17.69■□□□□ 0.42
C4orf48-201ENST00000409248 TGM4P49221 684 aa17.69■□□□□ 0.42
C4orf48-201ENST00000409248 MMP15P51511 669 aa17.69■□□□□ 0.42
C4orf48-201ENST00000409248 TAS2R43P59537 309 aa17.69■□□□□ 0.42
C4orf48-201ENST00000409248 ZNF92Q03936 586 aa17.69■□□□□ 0.42
C4orf48-201ENST00000409248 PSG7Q13046 419 aa17.69■□□□□ 0.42
C4orf48-201ENST00000409248 ALKBH1Q13686 389 aaKnown RBP17.69■□□□□ 0.42
C4orf48-201ENST00000409248 CCDC58Q4VC31 144 aa17.69■□□□□ 0.42
C4orf48-201ENST00000409248 FAM209AQ5JX71 171 aa17.69■□□□□ 0.42
C4orf48-201ENST00000409248 SVOPQ8N4V2 548 aa17.69■□□□□ 0.42
C4orf48-201ENST00000409248 RDH5Q92781 318 aa17.69■□□□□ 0.42
C4orf48-201ENST00000409248 SGK3Q96BR1 496 aa17.69■□□□□ 0.42
C4orf48-201ENST00000409248 HAVCR1Q96D42 359 aa17.69■□□□□ 0.42
C4orf48-201ENST00000409248 DIRC2Q96SL1 478 aa17.69■□□□□ 0.42
C4orf48-201ENST00000409248 ZDHHC8Q9ULC8 765 aa17.69■□□□□ 0.42
C4orf48-201ENST00000409248 SLC22A13Q9Y226 551 aa17.69■□□□□ 0.42
C4orf48-201ENST00000409248 VWC2LB2RUY7 222 aa17.68■□□□□ 0.42
C4orf48-201ENST00000409248 TPD52L2O43399 206 aaKnown RBP17.68■□□□□ 0.42
C4orf48-201ENST00000409248 NCR1O76036 304 aa17.68■□□□□ 0.42
C4orf48-201ENST00000409248 TTRP02766 147 aa17.68■□□□□ 0.42
C4orf48-201ENST00000409248 HPXP02790 462 aa17.68■□□□□ 0.42
C4orf48-201ENST00000409248 GIFP27352 417 aa17.68■□□□□ 0.42
C4orf48-201ENST00000409248 NR4A2P43354 598 aa17.68■□□□□ 0.42
C4orf48-201ENST00000409248 MAGEB1P43366 347 aa17.68■□□□□ 0.42
C4orf48-201ENST00000409248 CCR9P51686 369 aa17.68■□□□□ 0.42
C4orf48-201ENST00000409248 LOXL1Q08397 574 aaPredicted RBP17.68■□□□□ 0.42
C4orf48-201ENST00000409248 TMEM255AQ5JRV8 349 aa17.68■□□□□ 0.42
C4orf48-201ENST00000409248 PRSS35Q8N3Z0 413 aa17.68■□□□□ 0.42
C4orf48-201ENST00000409248 ZNF485Q8NCK3 441 aa17.68■□□□□ 0.42
C4orf48-201ENST00000409248 MAPK1IP1LQ8NDC0 245 aa17.68■□□□□ 0.42
C4orf48-201ENST00000409248 GTF3AQ92664 365 aaKnown RBP17.68■□□□□ 0.42
C4orf48-201ENST00000409248 PPP1R14AQ96A00 147 aa17.68■□□□□ 0.42
C4orf48-201ENST00000409248 RNF166Q96A37 237 aaPredicted RBP17.68■□□□□ 0.42
C4orf48-201ENST00000409248 SMR3AQ99954 134 aa17.68■□□□□ 0.42
C4orf48-201ENST00000409248 REPIN1Q9BWE0 567 aaKnown RBP17.68■□□□□ 0.42
C4orf48-201ENST00000409248 GSX1Q9H4S2 264 aaPredicted RBP17.68■□□□□ 0.42
C4orf48-201ENST00000409248 CHODLQ9H9P2 273 aa17.68■□□□□ 0.42
C4orf48-201ENST00000409248 SAP30LQ9HAJ7 183 aa17.68■□□□□ 0.42
C4orf48-201ENST00000409248 DECR2Q9NUI1 292 aa17.68■□□□□ 0.42
C4orf48-201ENST00000409248 A0A096LNT2 108 aa17.67■□□□□ 0.42
C4orf48-201ENST00000409248 GGT3PA6NGU5 568 aa17.67■□□□□ 0.42
C4orf48-201ENST00000409248 ZSCAN5BA6NJL1 495 aa17.67■□□□□ 0.42
C4orf48-201ENST00000409248 E9PI62 339 aa17.67■□□□□ 0.42
C4orf48-201ENST00000409248 SPRY3O43610 288 aa17.67■□□□□ 0.42
C4orf48-201ENST00000409248 ADH4P08319 380 aa17.67■□□□□ 0.42
C4orf48-201ENST00000409248 UBCP0CG48 685 aaKnown RBP17.67■□□□□ 0.42
C4orf48-201ENST00000409248 ACHEP22303 614 aa17.67■□□□□ 0.42
C4orf48-201ENST00000409248 USF1P22415 310 aaPredicted RBP17.67■□□□□ 0.42
C4orf48-201ENST00000409248 KIR3DL2P43630 455 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms