RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 CLEC18CQ8NCF0 446 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 OR4F17Q8NGA8 305 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 OR4C16Q8NGL9 310 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 OR10X1Q8NGY0 326 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 OR2V1Q8NHB1 315 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 OR51E1Q8TCB6 317 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 UCK1Q9HA47 277 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 CALHM2Q9HA72 323 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 MARCH5Q9NX47 278 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 BET1LQ9NYM9 111 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 COL16A1Q07092 1604 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-203ENST00000409050 C5P01031 1676 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 KCNE1BA0A087WTH5 132 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 AQP7P3A6NL99 342 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 CA3P07451 260 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 AMTP48728 403 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 PIGPP57054 158 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 FABP5Q01469 135 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 FOXO1Q12778 655 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 COTL1Q14019 142 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 GUK1Q16774 197 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 PTOV1Q86YD1 416 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 FAM219AQ8IW50 185 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 GPR32P1Q8NGA4 272 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 OR10G3Q8NGC4 313 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 OR2A1Q8NGT9 310 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 OR2T6Q8NHC8 308 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 PPP1R1CQ8WVI7 109 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 TMEM191AQ9H0A3 160 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 IKZF5Q9H5V7 419 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 ADGRL4Q9HBW9 690 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 CTSFQ9UBX1 484 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 MPC1Q9Y5U8 109 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 A0A0A6YYD5 115 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 A0A1B0GVG6 124 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 SH2D7A6NKC9 451 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-203ENST00000409050 CTSDP07339 412 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-203ENST00000409050 PTTG1IPP53801 180 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 P2RX3P56373 397 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 TCTAP57738 103 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 HERVK_113P61574 105 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 DLK1P80370 383 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 SQSTM1Q13501 440 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 CDONQ4KMG0 1287 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 SPANXN5Q5MJ07 72 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 ABLIM2Q6H8Q1 611 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 SH2D5Q6ZV89 423 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 SLC36A1Q7Z2H8 476 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 MTURNQ8N3F0 131 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 C17orf78Q8N4C9 275 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 ZNF740Q8NDX6 193 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 HMGCLL1Q8TB92 370 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 BCL2L2Q92843 193 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-203ENST00000409050 HLA-CQ95604 372 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 GPR137Q96N19 417 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 TAAR9Q96RI9 348 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 C12orf57Q99622 126 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 TMEM147Q9BVK8 224 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 ZNF355PQ9NSJ1 428 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 SLC22A13Q9Y226 551 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 ANKRD36CQ5JPF3 1778 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 TMEM235A6NFC5 223 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 NTHL1P78549 312 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 SIGIRRQ6IA17 410 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 CYHR1Q6ZMK1 362 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 ZNF429Q86V71 674 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 ZNF687Q8N1G0 1237 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 SCMH1Q96GD3 660 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 AHDC1Q5TGY3 1603 aaPredicted RBP5.5□□□□□ -1.53
SCN1A-203ENST00000409050 A0A1W2PQD3 144 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 ZNF320A2RRD8 509 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 NME2P1O60361 137 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 ANKRD33Q7Z3H0 272 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 PFN4Q8NHR9 129 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 AKR1E2Q96JD6 320 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 HHIPQ96QV1 700 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 PDCD1LG2Q9BQ51 273 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 ALX4Q9H161 411 aaPredicted RBP5.5□□□□□ -1.53
SCN1A-203ENST00000409050 GSX1Q9H4S2 264 aaPredicted RBP5.5□□□□□ -1.53
SCN1A-203ENST00000409050 OCEL1Q9H607 264 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 RASL12Q9NYN1 266 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 SLC25A37Q9NYZ2 338 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 CGGBP1Q9UFW8 167 aaPredicted RBP5.5□□□□□ -1.53
SCN1A-203ENST00000409050 NAT8Q9UHE5 227 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 FLVCR2Q9UPI3 526 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 CHST2Q9Y4C5 530 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 RGPD1P0DJD0 1748 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 LOXHD1Q8IVV2 1947 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 RGPD5Q99666 1765 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 CDC14CA4D256 554 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 SLC25A6P12236 298 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 ZBTB25P24278 435 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 CEACAM3P40198 252 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 ELLP55199 621 aaPredicted RBP5.5□□□□□ -1.53
SCN1A-203ENST00000409050 ZNF345Q14585 488 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 MIDNQ504T8 468 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 NFAM1Q8NET5 270 aaPredicted RBP5.5□□□□□ -1.53
SCN1A-203ENST00000409050 PERPQ96FX8 193 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 ATG101Q9BSB4 218 aa5.5□□□□□ -1.53
SCN1A-203ENST00000409050 SF3B5Q9BWJ5 86 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms