RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 MFGE8Q08431 387 aaPredicted RBP11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 POU4F3Q15319 338 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 PCGF3Q3KNV8 242 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 SFRP4Q6FHJ7 346 aaPredicted RBP11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 NHLRC1Q6VVB1 395 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 GLDNQ6ZMI3 551 aaPredicted RBP11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 SULF2Q8IWU5 870 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 SLC22A24Q8N4F4 322 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 WDSUB1Q8N9V3 476 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 TMEM229BQ8NBD8 167 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 DNAAF1Q8NEP3 725 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 LILRB4Q8NHJ6 448 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 FAM46BQ96A09 425 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 FOXN4Q96NZ1 517 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 PBOV1Q9GZY1 135 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 SEC61A2Q9H9S3 476 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 TMEM138Q9NPI0 162 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 TAS2R4Q9NYW5 299 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 KLK11Q9UBX7 282 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 FREM3P0C091 2139 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 TMEM272A0A1B0GTI8 110 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 NPIPA2E9PIF3 369 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 NPIPA3F8WFD2 350 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 FABP7O15540 132 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 TRAF3IP2O43734 574 aaPredicted RBP11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 ICMTO60725 284 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 MPZL1O95297 269 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 BPNT1O95861 308 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 ITGA5P08648 1049 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 GTF2F2P13984 249 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 CD99P14209 185 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 ZNF84P51523 738 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 CASP6P55212 293 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 RAC1P63000 192 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 FMODQ06828 376 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 ZMYND11Q15326 602 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 HIST3H3Q16695 136 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 GLYATL3Q5SZD4 288 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 GPAT4Q86UL3 456 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 LINC00346Q8IVM7 164 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 JAGN1Q8N5M9 183 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 OR2M7Q8NG81 312 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 OR1M1Q8NGA1 313 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 SLC25A28Q96A46 364 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 FAM173AQ9BQD7 235 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 SLC25A21Q9BQT8 299 aaPredicted RBP11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 SF3B5Q9BWJ5 86 aaKnown RBP11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 ZNF436Q9C0F3 470 aaPredicted RBP11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 ALX4Q9H161 411 aaPredicted RBP11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 PROK2Q9HC23 129 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 DEPPQ9NTK1 212 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 FAM206AQ9NX38 181 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 NKIRAS2Q9NYR9 191 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 B3GAT1Q9P2W7 334 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 FBLN5Q9UBX5 448 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 GDF2Q9UK05 429 aaPredicted RBP11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 EML6Q6ZMW3 1958 aa11.35□□□□□ -0.59
SMARCB1-203ENST00000407082 AKAP9Q99996 3911 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 A0A0G2JMM0 328 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 A0A1W2PPB8 328 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 A0A1W2PRS3 328 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 KIR3DP1A8MWS1 328 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 LINC01387J3KSC0 135 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 ARPC1BO15143 372 aaKnown RBP11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 CHRM2P08172 466 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 MELTFP08582 738 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 QDPRP09417 244 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 UBBP0CG47 229 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 DNASE1P24855 282 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 CA7P43166 264 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 CSNK1A1P48729 337 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 MEOX1P50221 254 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 P2RY4P51582 365 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 RAP2BP61225 183 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 CAMK2DQ13557 499 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 MEF2DQ14814 521 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 PDSS1Q5T2R2 415 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 RPUSD3Q6P087 351 aaKnown RBP11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 DOK3Q7L591 496 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 OR2W3Q7Z3T1 314 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 LSRQ86X29 649 aaPredicted RBP11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 GJC3Q8NFK1 279 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 OR6N1Q8NGY5 312 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 GPX8Q8TED1 209 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 JSRP1Q96MG2 331 aaPredicted RBP11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 TAAR6Q96RI8 345 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 EMC6Q9BV81 110 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 OR10A4Q9H209 315 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 CLEC4MQ9H2X3 399 aaPredicted RBP11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 METTL17Q9H7H0 456 aaPredicted RBP11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 GLTPQ9NZD2 209 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 MRPL15Q9P015 296 aaKnown RBP11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 FBXL2Q9UKC9 423 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 MRPS18CQ9Y3D5 142 aaKnown RBP11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 HSPB11Q9Y547 144 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 NPTNQ9Y639 398 aa11.34□□□□□ -0.59
SMARCB1-203ENST00000407082 FBN3Q75N90 2809 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 A0A1W2PNR3 127 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 CIB4A0PJX0 185 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms