RNA–Protein interactions for RNA: ENST00000405805.5

HMGB1-206, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HMGB1, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-206ENST00000405805 MBPP02686 304 aaPredicted RBP10.72□□□□□ -0.69
HMGB1-206ENST00000405805 LINC00271P0C7V0 271 aa10.72□□□□□ -0.69
HMGB1-206ENST00000405805 GALP22466 123 aa10.72□□□□□ -0.69
HMGB1-206ENST00000405805 DPP4P27487 766 aa10.72□□□□□ -0.69
HMGB1-206ENST00000405805 BIDP55957 195 aa10.72□□□□□ -0.69
HMGB1-206ENST00000405805 TFAP2EQ6VUC0 442 aa10.72□□□□□ -0.69
HMGB1-206ENST00000405805 FAM71CQ8NEG0 241 aa10.72□□□□□ -0.69
HMGB1-206ENST00000405805 FREM3P0C091 2139 aa10.72□□□□□ -0.69
HMGB1-206ENST00000405805 MEGF11A6BM72 1044 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 SNRPGP15A8MWD9 76 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 CYR61O00622 381 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 ABCD4O14678 606 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 FAM157BP0CG42 384 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 TMEM225BP0DP42 221 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 ERGP11308 486 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 CTLA4P16410 223 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 RAB5AP20339 215 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 FBLP22087 321 aaKnown RBP10.71□□□□□ -0.69
HMGB1-206ENST00000405805 OMGP23515 440 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 F2RL1P55085 397 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 SLC17A1Q14916 467 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 HAGHQ16775 308 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 ACOT7LQ6ZUV0 252 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 FAM57BQ71RH2 274 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 MITD1Q8WV92 249 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 NIPSNAP3BQ9BS92 247 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 MRI1Q9BV20 369 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 GPR61Q9BZJ8 451 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 EHFQ9NZC4 300 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 K7EQS6 105 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 CST2P09228 141 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 FBP1P09467 338 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 PRAMEF20Q5VT98 475 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 NPSR1Q6W5P4 371 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 Q6ZS52 159 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 ZNF595Q8IYB9 648 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 ABCA7Q8IZY2 2146 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 LRRC18Q8N456 261 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 MRPL38Q96DV4 380 aaKnown RBP10.71□□□□□ -0.69
HMGB1-206ENST00000405805 PACRGQ96M98 296 aaPredicted RBP10.71□□□□□ -0.69
HMGB1-206ENST00000405805 TSPAN32Q96QS1 320 aa10.71□□□□□ -0.69
HMGB1-206ENST00000405805 TMEM272A0A1B0GTI8 110 aa10.71□□□□□ -0.7
HMGB1-206ENST00000405805 PLRG1O43660 514 aaKnown RBP10.71□□□□□ -0.7
HMGB1-206ENST00000405805 CLN5O75503 358 aa10.71□□□□□ -0.7
HMGB1-206ENST00000405805 MDKP21741 143 aaPredicted RBP10.71□□□□□ -0.7
HMGB1-206ENST00000405805 TNFRSF4P43489 277 aa10.71□□□□□ -0.7
HMGB1-206ENST00000405805 PPP1R1AQ13522 171 aa10.71□□□□□ -0.7
HMGB1-206ENST00000405805 REC114Q7Z4M0 266 aa10.71□□□□□ -0.7
HMGB1-206ENST00000405805 MRGPREQ86SM8 312 aa10.71□□□□□ -0.7
HMGB1-206ENST00000405805 OR51E1Q8TCB6 317 aa10.71□□□□□ -0.7
HMGB1-206ENST00000405805 TMEM37Q8WXS4 190 aa10.71□□□□□ -0.7
HMGB1-206ENST00000405805 LCORQ96JN0 433 aaPredicted RBP10.71□□□□□ -0.7
HMGB1-206ENST00000405805 SNX22Q96L94 193 aa10.71□□□□□ -0.7
HMGB1-206ENST00000405805 C4orf45Q96LM5 186 aa10.71□□□□□ -0.7
HMGB1-206ENST00000405805 RBM24Q9BX46 236 aaKnown RBP10.71□□□□□ -0.7
HMGB1-206ENST00000405805 TINAGQ9UJW2 476 aa10.71□□□□□ -0.7
HMGB1-206ENST00000405805 ANAPC1Q9H1A4 1944 aa10.71□□□□□ -0.7
HMGB1-206ENST00000405805 SNRNP200O75643 2136 aaKnown RBP10.7□□□□□ -0.7
HMGB1-206ENST00000405805 EPOPA6NHQ4 379 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 H0YIG0 161 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 KLF4O43474 513 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 FABP6P51161 128 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 P2RY4P51582 365 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 CYCSP99999 105 aaKnown RBP10.7□□□□□ -0.7
HMGB1-206ENST00000405805 TLE4Q04727 773 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 AWAT1Q58HT5 328 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 PABPC1L2AQ5JQF8 200 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 C17orf78Q8N4C9 275 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 ELSPBP1Q96BH3 223 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 CUTCQ9NTM9 273 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 OBP2AQ9NY56 170 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 WIF1Q9Y5W5 379 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 MDC1Q14676 2089 aaKnown RBP10.7□□□□□ -0.7
HMGB1-206ENST00000405805 KIR2DS5A0A0G2JLQ3 304 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 A0A0G2JNG1 304 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 A0A1B0GTQ1 180 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 FAM221AA4D161 298 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 KIR2DS3K7RE56 304 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 ALOX5APP20292 161 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 CRABP1P29762 137 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 GPX4P36969 197 aaPredicted RBP10.7□□□□□ -0.7
HMGB1-206ENST00000405805 RABIFP47224 123 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 KIR2DS5Q14953 304 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 ELOCQ15369 112 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 GAB4Q2WGN9 574 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 C1orf140Q5VVS0 124 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 TMEM92Q6UXU6 159 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 ADGRE4PQ86SQ3 457 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 CARFQ8N187 725 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 KIRREL1Q96J84 757 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 SEMA6CQ9H3T2 930 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 CBLN4Q9NTU7 201 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 SERTAD3Q9UJW9 196 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 A0A1W2PNR3 127 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 C7orf77A4D0Y5 90 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 VSTM2BA6NLU5 285 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 OR4C45A6NMZ5 311 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 PRR32B1ATL7 298 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 ADAP1O75689 374 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 DRD1P21728 446 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms