RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 DOCK11Q5JSL3 2073 aa11.13□□□□□ -0.63
SDF4-203ENST00000403997 TRIM77I1YAP6 450 aa11.12□□□□□ -0.63
SDF4-203ENST00000403997 PRODHO43272 600 aa11.12□□□□□ -0.63
SDF4-203ENST00000403997 FSHBP01225 129 aa11.12□□□□□ -0.63
SDF4-203ENST00000403997 CFL1P23528 166 aaKnown RBP11.12□□□□□ -0.63
SDF4-203ENST00000403997 CD80P33681 288 aa11.12□□□□□ -0.63
SDF4-203ENST00000403997 NAA10P41227 235 aaPredicted RBP11.12□□□□□ -0.63
SDF4-203ENST00000403997 PITPNBP48739 271 aa11.12□□□□□ -0.63
SDF4-203ENST00000403997 FAM3AP98173 230 aa11.12□□□□□ -0.63
SDF4-203ENST00000403997 HOXA4Q00056 320 aaPredicted RBP11.12□□□□□ -0.63
SDF4-203ENST00000403997 PAX8Q06710 450 aa11.12□□□□□ -0.63
SDF4-203ENST00000403997 KCNJ8Q15842 424 aa11.12□□□□□ -0.63
SDF4-203ENST00000403997 SNAPC1Q16533 368 aa11.12□□□□□ -0.63
SDF4-203ENST00000403997 GFOD2Q3B7J2 385 aa11.12□□□□□ -0.63
SDF4-203ENST00000403997 SLC35D3Q5M8T2 416 aa11.12□□□□□ -0.63
SDF4-203ENST00000403997 BTNL3Q6UXE8 466 aa11.12□□□□□ -0.63
SDF4-203ENST00000403997 DCDC5Q6ZRR9 648 aa11.12□□□□□ -0.63
SDF4-203ENST00000403997 PRSS45Q7RTY3 260 aa11.12□□□□□ -0.63
SDF4-203ENST00000403997 BBS1Q8NFJ9 593 aa11.12□□□□□ -0.63
SDF4-203ENST00000403997 OR8S1Q8NH09 359 aa11.12□□□□□ -0.63
SDF4-203ENST00000403997 OR5K1Q8NHB7 308 aa11.12□□□□□ -0.63
SDF4-203ENST00000403997 RAB40AQ8WXH6 277 aa11.12□□□□□ -0.63
SDF4-203ENST00000403997 DNAJC9Q8WXX5 260 aa11.12□□□□□ -0.63
SDF4-203ENST00000403997 SLC25A19Q9HC21 320 aa11.12□□□□□ -0.63
SDF4-203ENST00000403997 NUP50Q9UKX7 468 aa11.12□□□□□ -0.63
SDF4-203ENST00000403997 IGHV2-70DA0A0C4DH43 119 aa11.11□□□□□ -0.63
SDF4-203ENST00000403997 hCG_38984A0A1B0GV85 526 aa11.11□□□□□ -0.63
SDF4-203ENST00000403997 hCG_1807616A0A1W2PRN6 198 aa11.11□□□□□ -0.63
SDF4-203ENST00000403997 C3orf80F5H4A9 247 aa11.11□□□□□ -0.63
SDF4-203ENST00000403997 LGALS8O00214 317 aa11.11□□□□□ -0.63
SDF4-203ENST00000403997 PTBP3O95758 552 aaKnown RBP11.11□□□□□ -0.63
SDF4-203ENST00000403997 GSK3AP49840 483 aa11.11□□□□□ -0.63
SDF4-203ENST00000403997 DAPP51397 102 aa11.11□□□□□ -0.63
SDF4-203ENST00000403997 CRISP1P54107 249 aa11.11□□□□□ -0.63
SDF4-203ENST00000403997 PAX2Q02962 417 aa11.11□□□□□ -0.63
SDF4-203ENST00000403997 APOFQ13790 326 aa11.11□□□□□ -0.63
SDF4-203ENST00000403997 OR8B8Q15620 311 aa11.11□□□□□ -0.63
SDF4-203ENST00000403997 LRRN1Q6UXK5 716 aa11.11□□□□□ -0.63
SDF4-203ENST00000403997 C12orf54Q6X4T0 127 aa11.11□□□□□ -0.63
SDF4-203ENST00000403997 ZNF826PQ6ZT77 177 aa11.11□□□□□ -0.63
SDF4-203ENST00000403997 UTP4Q969X6 686 aaKnown RBP11.11□□□□□ -0.63
SDF4-203ENST00000403997 MMADHCQ9H3L0 296 aaPredicted RBP11.11□□□□□ -0.63
SDF4-203ENST00000403997 ZNF319Q9P2F9 582 aa11.11□□□□□ -0.63
SDF4-203ENST00000403997 CLN8Q9UBY8 286 aa11.11□□□□□ -0.63
SDF4-203ENST00000403997 LAMP5Q9UJQ1 280 aa11.11□□□□□ -0.63
SDF4-203ENST00000403997 KLHDC2Q9Y2U9 406 aa11.11□□□□□ -0.63
SDF4-203ENST00000403997 TRAV38-1A0A0B4J264 116 aa11.1□□□□□ -0.63
SDF4-203ENST00000403997 KIR2DS1A0A191URI9 304 aa11.1□□□□□ -0.63
SDF4-203ENST00000403997 HAX1O00165 279 aa11.1□□□□□ -0.63
SDF4-203ENST00000403997 ATP5HO75947 161 aa11.1□□□□□ -0.63
SDF4-203ENST00000403997 SLC2A5P22732 501 aa11.1□□□□□ -0.63
SDF4-203ENST00000403997 GNALP38405 381 aa11.1□□□□□ -0.63
SDF4-203ENST00000403997 PSMB10P40306 273 aa11.1□□□□□ -0.63
SDF4-203ENST00000403997 HCCSP53701 268 aa11.1□□□□□ -0.63
SDF4-203ENST00000403997 ACTG1P63261 375 aa11.1□□□□□ -0.63
SDF4-203ENST00000403997 PTGES3Q15185 160 aaKnown RBP11.1□□□□□ -0.63
SDF4-203ENST00000403997 KLF17Q5JT82 389 aaPredicted RBP11.1□□□□□ -0.63
SDF4-203ENST00000403997 WDR25Q64LD2 544 aaPredicted RBP11.1□□□□□ -0.63
SDF4-203ENST00000403997 FAHD1Q6P587 224 aa11.1□□□□□ -0.63
SDF4-203ENST00000403997 RBMS3Q6XE24 437 aaKnown RBP11.1□□□□□ -0.63
SDF4-203ENST00000403997 KRT77Q7Z794 578 aa11.1□□□□□ -0.63
SDF4-203ENST00000403997 CSNK2A3Q8NEV1 391 aa11.1□□□□□ -0.63
SDF4-203ENST00000403997 FAM216AQ8WUB2 273 aa11.1□□□□□ -0.63
SDF4-203ENST00000403997 TECTBQ96PL2 329 aa11.1□□□□□ -0.63
SDF4-203ENST00000403997 TEAD3Q99594 435 aa11.1□□□□□ -0.63
SDF4-203ENST00000403997 NUDT16L1Q9BRJ7 211 aaKnown RBP11.1□□□□□ -0.63
SDF4-203ENST00000403997 PAPOLGQ9BWT3 736 aaKnown RBP11.1□□□□□ -0.63
SDF4-203ENST00000403997 RGCCQ9H4X1 137 aa11.1□□□□□ -0.63
SDF4-203ENST00000403997 TRIM36Q9NQ86 728 aa11.1□□□□□ -0.63
SDF4-203ENST00000403997 ERVK-18Q9QC07 812 aa11.1□□□□□ -0.63
SDF4-203ENST00000403997 ZNF69Q9UC07 566 aa11.1□□□□□ -0.63
SDF4-203ENST00000403997 RHBDD3Q9Y3P4 386 aa11.1□□□□□ -0.63
SDF4-203ENST00000403997 IGHV3OR16-10A0A075B7F0 116 aa11.09□□□□□ -0.63
SDF4-203ENST00000403997 OOEPA6NGQ2 149 aa11.09□□□□□ -0.63
SDF4-203ENST00000403997 G3V2T6 193 aa11.09□□□□□ -0.63
SDF4-203ENST00000403997 PHYHO14832 338 aa11.09□□□□□ -0.63
SDF4-203ENST00000403997 ADAM20O43506 726 aa11.09□□□□□ -0.63
SDF4-203ENST00000403997 NDUFA2O43678 99 aa11.09□□□□□ -0.63
SDF4-203ENST00000403997 GYPAP02724 150 aa11.09□□□□□ -0.63
SDF4-203ENST00000403997 ALOX5APP20292 161 aa11.09□□□□□ -0.63
SDF4-203ENST00000403997 ESRRGP62508 458 aa11.09□□□□□ -0.63
SDF4-203ENST00000403997 POU4F2Q12837 409 aa11.09□□□□□ -0.63
SDF4-203ENST00000403997 ATP6AP1Q15904 470 aa11.09□□□□□ -0.63
SDF4-203ENST00000403997 SNCBQ16143 134 aa11.09□□□□□ -0.63
SDF4-203ENST00000403997 C1orf146Q5VVC0 180 aa11.09□□□□□ -0.63
SDF4-203ENST00000403997 ZNF841Q6ZN19 808 aa11.09□□□□□ -0.63
SDF4-203ENST00000403997 BCL6BQ8N143 479 aaPredicted RBP11.09□□□□□ -0.63
SDF4-203ENST00000403997 PARP8Q8N3A8 854 aa11.09□□□□□ -0.63
SDF4-203ENST00000403997 SIGLECL1Q8N7X8 197 aa11.09□□□□□ -0.63
SDF4-203ENST00000403997 GCDHQ92947 438 aaPredicted RBP11.09□□□□□ -0.63
SDF4-203ENST00000403997 YIPF3Q9GZM5 350 aa11.09□□□□□ -0.63
SDF4-203ENST00000403997 MS4A7Q9GZW8 240 aaPredicted RBP11.09□□□□□ -0.63
SDF4-203ENST00000403997 PPP1R3EQ9H7J1 279 aa11.09□□□□□ -0.63
SDF4-203ENST00000403997 NIPAL2Q9H841 368 aa11.09□□□□□ -0.63
SDF4-203ENST00000403997 ESM1Q9NQ30 184 aa11.09□□□□□ -0.63
SDF4-203ENST00000403997 AP4S1Q9Y587 144 aa11.09□□□□□ -0.63
SDF4-203ENST00000403997 CCDC182A6NF36 153 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 ANXA2P2A6NMY6 339 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 PSMD9O00233 223 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 PRKYO43930 277 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms