RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 ZNF540Q8NDQ6 660 aa21.55■■□□□ 1.04
TMEM55B-202ENST00000398020 UBASH3BQ8TF42 649 aa21.55■■□□□ 1.04
TMEM55B-202ENST00000398020 MRPL48Q96GC5 212 aaKnown RBP21.55■■□□□ 1.04
TMEM55B-202ENST00000398020 FAM71F1Q96KD3 344 aaPredicted RBP21.55■■□□□ 1.04
TMEM55B-202ENST00000398020 JAM3Q9BX67 310 aa21.55■■□□□ 1.04
TMEM55B-202ENST00000398020 CLEC2DQ9UHP7 191 aa21.55■■□□□ 1.04
TMEM55B-202ENST00000398020 IGHV3-64DA0A0J9YX35 117 aa21.54■■□□□ 1.04
TMEM55B-202ENST00000398020 TRIM64A6NGJ6 449 aa21.54■■□□□ 1.04
TMEM55B-202ENST00000398020 TRIM64BA6NI03 449 aa21.54■■□□□ 1.04
TMEM55B-202ENST00000398020 H3BSH0 61 aa21.54■■□□□ 1.04
TMEM55B-202ENST00000398020 P2RY10O00398 339 aa21.54■■□□□ 1.04
TMEM55B-202ENST00000398020 ADH4P08319 380 aa21.54■■□□□ 1.04
TMEM55B-202ENST00000398020 ACKR3P25106 362 aa21.54■■□□□ 1.04
TMEM55B-202ENST00000398020 WDR38Q5JTN6 314 aa21.54■■□□□ 1.04
TMEM55B-202ENST00000398020 FAM209AQ5JX71 171 aa21.54■■□□□ 1.04
TMEM55B-202ENST00000398020 CLEC2AQ6UVW9 174 aa21.54■■□□□ 1.04
TMEM55B-202ENST00000398020 DNM1P46Q6ZS02 220 aa21.54■■□□□ 1.04
TMEM55B-202ENST00000398020 DIRC2Q96SL1 478 aa21.54■■□□□ 1.04
TMEM55B-202ENST00000398020 TREM2Q9NZC2 230 aa21.54■■□□□ 1.04
TMEM55B-202ENST00000398020 CNOT2Q9NZN8 540 aaKnown RBP21.54■■□□□ 1.04
TMEM55B-202ENST00000398020 F5H5P2 479 aa21.53■■□□□ 1.04
TMEM55B-202ENST00000398020 PIPP12273 146 aaPredicted RBP21.53■■□□□ 1.04
TMEM55B-202ENST00000398020 MYL12AP19105 171 aa21.53■■□□□ 1.04
TMEM55B-202ENST00000398020 COL8A2P25067 703 aa21.53■■□□□ 1.04
TMEM55B-202ENST00000398020 NANOS3P60323 173 aaKnown RBP21.53■■□□□ 1.04
TMEM55B-202ENST00000398020 OR8B8Q15620 311 aa21.53■■□□□ 1.04
TMEM55B-202ENST00000398020 OR2G6Q5TZ20 316 aa21.53■■□□□ 1.04
TMEM55B-202ENST00000398020 SYS1Q8N2H4 156 aa21.53■■□□□ 1.04
TMEM55B-202ENST00000398020 PPP1R3EQ9H7J1 279 aa21.53■■□□□ 1.04
TMEM55B-202ENST00000398020 ZNF391Q9UJN7 358 aa21.53■■□□□ 1.04
TMEM55B-202ENST00000398020 PTGES3LE9PB15 166 aa21.53■■□□□ 1.04
TMEM55B-202ENST00000398020 IGLV3-1P01715 115 aa21.53■■□□□ 1.04
TMEM55B-202ENST00000398020 RBMXP38159 391 aaKnown RBP21.53■■□□□ 1.04
TMEM55B-202ENST00000398020 KIR3DL2P43630 455 aa21.53■■□□□ 1.04
TMEM55B-202ENST00000398020 SPNS3Q6ZMD2 512 aa21.53■■□□□ 1.04
TMEM55B-202ENST00000398020 STX19Q8N4C7 294 aa21.53■■□□□ 1.04
TMEM55B-202ENST00000398020 FAM168AQ92567 244 aa21.53■■□□□ 1.04
TMEM55B-202ENST00000398020 SGCDQ92629 289 aa21.53■■□□□ 1.04
TMEM55B-202ENST00000398020 MRPL15Q9P015 296 aaKnown RBP21.53■■□□□ 1.04
TMEM55B-202ENST00000398020 CACNG2Q9Y698 323 aa21.53■■□□□ 1.04
TMEM55B-202ENST00000398020 IGHV4-30-2A0A087WSY4 118 aa21.52■■□□□ 1.04
TMEM55B-202ENST00000398020 E9PI62 339 aa21.52■■□□□ 1.04
TMEM55B-202ENST00000398020 CD55P08174 381 aa21.52■■□□□ 1.04
TMEM55B-202ENST00000398020 HTR1AP08908 422 aa21.52■■□□□ 1.04
TMEM55B-202ENST00000398020 TNFSF4P23510 183 aa21.52■■□□□ 1.04
TMEM55B-202ENST00000398020 C21orf33P30042 268 aaPredicted RBP21.52■■□□□ 1.04
TMEM55B-202ENST00000398020 DDOSTP39656 456 aa21.52■■□□□ 1.04
TMEM55B-202ENST00000398020 TGIF2LYQ8IUE0 185 aa21.52■■□□□ 1.04
TMEM55B-202ENST00000398020 OR2G2Q8NGZ5 317 aa21.52■■□□□ 1.04
TMEM55B-202ENST00000398020 ITLN1Q8WWA0 313 aa21.52■■□□□ 1.04
TMEM55B-202ENST00000398020 YIPF5Q969M3 257 aa21.52■■□□□ 1.04
TMEM55B-202ENST00000398020 OR2V2Q96R30 315 aa21.52■■□□□ 1.04
TMEM55B-202ENST00000398020 MYCBPQ99417 103 aaPredicted RBP21.52■■□□□ 1.04
TMEM55B-202ENST00000398020 ADAT1Q9BUB4 502 aaKnown RBP21.52■■□□□ 1.04
TMEM55B-202ENST00000398020 EGLN1Q9GZT9 426 aa21.52■■□□□ 1.04
TMEM55B-202ENST00000398020 FKBP14Q9NWM8 211 aa21.52■■□□□ 1.04
TMEM55B-202ENST00000398020 FRRS1LQ9P0K9 344 aa21.52■■□□□ 1.04
TMEM55B-202ENST00000398020 EXOSC1Q9Y3B2 195 aaKnown RBP21.52■■□□□ 1.04
TMEM55B-202ENST00000398020 RHBDD3Q9Y3P4 386 aa21.52■■□□□ 1.04
TMEM55B-202ENST00000398020 HIVEP1P15822 2718 aa21.52■■□□□ 1.03
TMEM55B-202ENST00000398020 ANKRD30BLA7E2S9 258 aa21.51■■□□□ 1.03
TMEM55B-202ENST00000398020 PDLIM4P50479 330 aa21.51■■□□□ 1.03
TMEM55B-202ENST00000398020 OR8G1Q15617 311 aa21.51■■□□□ 1.03
TMEM55B-202ENST00000398020 RDH10Q8IZV5 341 aa21.51■■□□□ 1.03
TMEM55B-202ENST00000398020 ZNF786Q8N393 782 aa21.51■■□□□ 1.03
TMEM55B-202ENST00000398020 RDH5Q92781 318 aa21.51■■□□□ 1.03
TMEM55B-202ENST00000398020 PAK1IP1Q9NWT1 392 aaPredicted RBP21.51■■□□□ 1.03
TMEM55B-202ENST00000398020 IGHV1-69-2A0A0G2JMI3 117 aa21.5■■□□□ 1.03
TMEM55B-202ENST00000398020 A0A1B0GTI1 187 aa21.5■■□□□ 1.03
TMEM55B-202ENST00000398020 KLHL36Q8N4N3 616 aa21.5■■□□□ 1.03
TMEM55B-202ENST00000398020 C10orf105Q8TEF2 133 aa21.5■■□□□ 1.03
TMEM55B-202ENST00000398020 PAPOLGQ9BWT3 736 aaKnown RBP21.5■■□□□ 1.03
TMEM55B-202ENST00000398020 CHCHD3Q9NX63 227 aaKnown RBP21.5■■□□□ 1.03
TMEM55B-202ENST00000398020 SCN3BQ9NY72 215 aa21.5■■□□□ 1.03
TMEM55B-202ENST00000398020 IL19Q9UHD0 177 aa21.5■■□□□ 1.03
TMEM55B-202ENST00000398020 A0A1B0GWJ7 208 aa21.5■■□□□ 1.03
TMEM55B-202ENST00000398020 GTF2A1P52655 376 aaPredicted RBP21.5■■□□□ 1.03
TMEM55B-202ENST00000398020 CSNK2BP67870 215 aa21.5■■□□□ 1.03
TMEM55B-202ENST00000398020 CSNK2A3Q8NEV1 391 aa21.5■■□□□ 1.03
TMEM55B-202ENST00000398020 MYOZ1Q9NP98 299 aaPredicted RBP21.5■■□□□ 1.03
TMEM55B-202ENST00000398020 CAB39Q9Y376 341 aaPredicted RBP21.5■■□□□ 1.03
TMEM55B-202ENST00000398020 LOC390937A0A1W2PQ73 354 aa21.49■■□□□ 1.03
TMEM55B-202ENST00000398020 CRYBB2P43320 205 aa21.49■■□□□ 1.03
TMEM55B-202ENST00000398020 MAP2K3P46734 347 aa21.49■■□□□ 1.03
TMEM55B-202ENST00000398020 FDX2Q6P4F2 183 aa21.49■■□□□ 1.03
TMEM55B-202ENST00000398020 TMPRSS11AQ6ZMR5 421 aa21.49■■□□□ 1.03
TMEM55B-202ENST00000398020 SEMA6DQ8NFY4 1073 aa21.49■■□□□ 1.03
TMEM55B-202ENST00000398020 GATAD2BQ8WXI9 593 aa21.49■■□□□ 1.03
TMEM55B-202ENST00000398020 MEGF10Q96KG7 1140 aa21.49■■□□□ 1.03
TMEM55B-202ENST00000398020 UBAP1Q9NZ09 502 aa21.49■■□□□ 1.03
TMEM55B-202ENST00000398020 PIGLQ9Y2B2 252 aa21.49■■□□□ 1.03
TMEM55B-202ENST00000398020 A6NIN4 97 aa21.48■■□□□ 1.03
TMEM55B-202ENST00000398020 DHRS3O75911 302 aa21.48■■□□□ 1.03
TMEM55B-202ENST00000398020 CSF3P09919 207 aa21.48■■□□□ 1.03
TMEM55B-202ENST00000398020 FAHP16930 419 aa21.48■■□□□ 1.03
TMEM55B-202ENST00000398020 GBX2P52951 348 aaPredicted RBP21.48■■□□□ 1.03
TMEM55B-202ENST00000398020 DSCR9P59020 149 aa21.48■■□□□ 1.03
TMEM55B-202ENST00000398020 MAB21L1Q13394 359 aa21.48■■□□□ 1.03
TMEM55B-202ENST00000398020 MED21Q13503 144 aa21.48■■□□□ 1.03
TMEM55B-202ENST00000398020 XAF1Q6GPH4 301 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms