RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 CST2P09228 141 aa14.05□□□□□ -0.16
GNE-202ENST00000396594 OR5H8P0DN80 308 aa14.05□□□□□ -0.16
GNE-202ENST00000396594 EPXP11678 715 aa14.05□□□□□ -0.16
GNE-202ENST00000396594 WNT3P56703 355 aa14.05□□□□□ -0.16
GNE-202ENST00000396594 UBE2G1P62253 170 aa14.05□□□□□ -0.16
GNE-202ENST00000396594 TAF9Q16594 264 aa14.05□□□□□ -0.16
GNE-202ENST00000396594 SOX7Q9BT81 388 aa14.05□□□□□ -0.16
GNE-202ENST00000396594 KIF13BQ9NQT8 1826 aa14.05□□□□□ -0.16
GNE-202ENST00000396594 EVPLQ92817 2033 aa14.05□□□□□ -0.16
GNE-202ENST00000396594 A0A0B4J2A0 478 aa14.05□□□□□ -0.16
GNE-202ENST00000396594 NPY4RP50391 375 aa14.05□□□□□ -0.16
GNE-202ENST00000396594 EMC6Q9BV81 110 aa14.05□□□□□ -0.16
GNE-202ENST00000396594 NAA50Q9GZZ1 169 aaKnown RBP14.05□□□□□ -0.16
GNE-202ENST00000396594 RANGRFQ9HD47 186 aaPredicted RBP14.05□□□□□ -0.16
GNE-202ENST00000396594 SHPKQ9UHJ6 478 aa14.05□□□□□ -0.16
GNE-202ENST00000396594 INSM1Q01101 510 aaPredicted RBP14.05□□□□□ -0.16
GNE-202ENST00000396594 EDDM3AQ14507 147 aa14.05□□□□□ -0.16
GNE-202ENST00000396594 WFDC8Q8IUA0 241 aa14.05□□□□□ -0.16
GNE-202ENST00000396594 M0QYG6 137 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 EBPQ15125 230 aaKnown RBP14.04□□□□□ -0.16
GNE-202ENST00000396594 TMEM128Q5BJH2 165 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 C17orf78Q8N4C9 275 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 OR11G2Q8NGC1 345 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 PLA2G2FQ9BZM2 168 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 CXXC4Q9H2H0 198 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 LHX9Q9NQ69 397 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 B4GALT3O60512 393 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 H2AFB1P0C5Y9 115 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 ALOX5APP20292 161 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 PTAFRP25105 342 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 UBE2IP63279 158 aaKnown RBP14.04□□□□□ -0.16
GNE-202ENST00000396594 GUSBP11Q6P575 273 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 MFSD4AQ8N468 514 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 C8orf44Q96CB5 159 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 CES1P1Q9UKY3 287 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 K7EQS6 105 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 ACKR3P25106 362 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 NUBP1P53384 320 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 HCCSP53701 268 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 NKG7Q16617 165 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 ATP6V1FQ16864 119 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 OR1J1Q8NGS3 322 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 OR2G3Q8NGZ4 309 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 RAB1BQ9H0U4 201 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 SIRT3Q9NTG7 399 aaPredicted RBP14.04□□□□□ -0.16
GNE-202ENST00000396594 OR5H15A6NDH6 313 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 PPP1R2P9O14990 202 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 TMEM41BQ5BJD5 291 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 ZNF775Q96BV0 537 aaPredicted RBP14.04□□□□□ -0.16
GNE-202ENST00000396594 ST3GAL6Q9Y274 331 aa14.04□□□□□ -0.16
GNE-202ENST00000396594 PPM1DO15297 605 aa14.03□□□□□ -0.16
GNE-202ENST00000396594 ANKRD34CP0C6C1 535 aa14.03□□□□□ -0.16
GNE-202ENST00000396594 AKR1E2Q96JD6 320 aa14.03□□□□□ -0.16
GNE-202ENST00000396594 OR6C3Q9NZP0 311 aa14.03□□□□□ -0.16
GNE-202ENST00000396594 ICAM5Q9UMF0 924 aa14.03□□□□□ -0.16
GNE-202ENST00000396594 CTDSPLO15194 276 aa14.03□□□□□ -0.16
GNE-202ENST00000396594 IGF2P01344 180 aa14.03□□□□□ -0.16
GNE-202ENST00000396594 HOXB1P14653 301 aaPredicted RBP14.03□□□□□ -0.16
GNE-202ENST00000396594 RAB4AP20338 218 aa14.03□□□□□ -0.16
GNE-202ENST00000396594 SSX1Q16384 188 aa14.03□□□□□ -0.16
GNE-202ENST00000396594 DDA1Q9BW61 102 aa14.03□□□□□ -0.16
GNE-202ENST00000396594 TMEM210A6NLX4 147 aa14.03□□□□□ -0.16
GNE-202ENST00000396594 B3GALT4O96024 378 aa14.03□□□□□ -0.16
GNE-202ENST00000396594 PRRX1P54821 245 aa14.03□□□□□ -0.16
GNE-202ENST00000396594 GALNT16Q8N428 558 aa14.03□□□□□ -0.16
GNE-202ENST00000396594 OR5T1Q8NG75 326 aa14.03□□□□□ -0.16
GNE-202ENST00000396594 FAM96BQ9Y3D0 163 aa14.03□□□□□ -0.16
GNE-202ENST00000396594 LRP12Q9Y561 859 aa14.03□□□□□ -0.16
GNE-202ENST00000396594 CDONQ4KMG0 1287 aa14.03□□□□□ -0.16
GNE-202ENST00000396594 Q6ZS52 159 aa14.03□□□□□ -0.16
GNE-202ENST00000396594 MED30Q96HR3 178 aa14.03□□□□□ -0.16
GNE-202ENST00000396594 RAB40CQ96S21 281 aa14.03□□□□□ -0.16
GNE-202ENST00000396594 UQCC3Q6UW78 93 aa14.02□□□□□ -0.16
GNE-202ENST00000396594 VSTM2AQ8TAG5 236 aa14.02□□□□□ -0.16
GNE-202ENST00000396594 ADAT1Q9BUB4 502 aaKnown RBP14.02□□□□□ -0.16
GNE-202ENST00000396594 TAS2R16Q9NYV7 291 aa14.02□□□□□ -0.16
GNE-202ENST00000396594 hADV38S2A0JD32 116 aa14.02□□□□□ -0.16
GNE-202ENST00000396594 FBXO24O75426 580 aa14.02□□□□□ -0.16
GNE-202ENST00000396594 CLN5O75503 358 aa14.02□□□□□ -0.16
GNE-202ENST00000396594 BAK1Q16611 211 aa14.02□□□□□ -0.16
GNE-202ENST00000396594 TCTN1Q2MV58 587 aa14.02□□□□□ -0.16
GNE-202ENST00000396594 ZNF793Q6ZN11 406 aa14.02□□□□□ -0.16
GNE-202ENST00000396594 APOBEC4Q8WW27 367 aaKnown RBP14.02□□□□□ -0.16
GNE-202ENST00000396594 C4orf45Q96LM5 186 aa14.02□□□□□ -0.16
GNE-202ENST00000396594 SARGQ9BW04 601 aa14.02□□□□□ -0.16
GNE-202ENST00000396594 SNRNP70P08621 437 aaKnown RBP14.02□□□□□ -0.17
GNE-202ENST00000396594 FGF2P09038 288 aa14.02□□□□□ -0.17
GNE-202ENST00000396594 OR52N4Q8NGI2 321 aa14.02□□□□□ -0.17
GNE-202ENST00000396594 GSX2Q9BZM3 304 aa14.02□□□□□ -0.17
GNE-202ENST00000396594 RAB18Q9NP72 206 aa14.02□□□□□ -0.17
GNE-202ENST00000396594 TAAR3PQ9P1P4 343 aa14.02□□□□□ -0.17
GNE-202ENST00000396594 COPS3Q9UNS2 423 aa14.02□□□□□ -0.17
GNE-202ENST00000396594 RBBP6Q7Z6E9 1792 aaKnown RBP14.02□□□□□ -0.17
GNE-202ENST00000396594 CLEC2LP0C7M8 214 aa14.02□□□□□ -0.17
GNE-202ENST00000396594 SULT1A3P0DMM9 295 aa14.02□□□□□ -0.17
GNE-202ENST00000396594 SULT1A4P0DMN0 295 aa14.02□□□□□ -0.17
GNE-202ENST00000396594 MICBQ29980 383 aa14.02□□□□□ -0.17
GNE-202ENST00000396594 TCTE3Q8IZS6 198 aa14.02□□□□□ -0.17
GNE-202ENST00000396594 ZBTB34Q8NCN2 500 aa14.02□□□□□ -0.17
GNE-202ENST00000396594 ANKRD10Q9NXR5 420 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms