RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 RHOFQ9HBH0 211 aa11.81□□□□□ -0.52
TRIM40-207ENST00000396581 TREM1Q9NP99 234 aa11.81□□□□□ -0.52
TRIM40-207ENST00000396581 FLVCR1Q9Y5Y0 555 aa11.81□□□□□ -0.52
TRIM40-207ENST00000396581 BDP1A6H8Y1 2624 aa11.81□□□□□ -0.52
TRIM40-207ENST00000396581 A0A0A6YYD4 124 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 IGKV1D-43A0A0B4J1Z2 117 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 ZNF705EA8MWA4 302 aaPredicted RBP11.8□□□□□ -0.52
TRIM40-207ENST00000396581 CSTBP04080 98 aaKnown RBP11.8□□□□□ -0.52
TRIM40-207ENST00000396581 CD5P06127 495 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 GPR85P60893 370 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 FMODQ06828 376 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 PDZK1IP1Q13113 114 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 LYSMD4Q5XG99 296 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 RTN4RL2Q86UN3 420 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 WDFY1Q8IWB7 410 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 ZNF441Q8N8Z8 693 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 ZNF248Q8NDW4 579 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 SFT2D1Q8WV19 159 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 TSLPQ969D9 159 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 OCSTAMPQ9BR26 566 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 SLC7A5P2Q9GIP4 190 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 OR11A1Q9GZK7 315 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 OR5AC2Q9NZP5 309 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 KLHL13Q9P2N7 655 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 SRPK3Q9UPE1 567 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 COLCA2A8K830 154 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 FAM157AC9JC47 383 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 H3BMH7 237 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 FCGR3AP08637 254 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 GIMD1P0DJR0 217 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 DAP3P51398 398 aaKnown RBP11.8□□□□□ -0.52
TRIM40-207ENST00000396581 EMP2P54851 167 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 FOXK1P85037 733 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 PLAC9Q5JTB6 97 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 PMS2CLQ68D20 193 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 ZNF585AQ6P3V2 769 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 ANGPTL5Q86XS5 388 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 POC1AQ8NBT0 407 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 OR2I1PQ8NGU4 316 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 RHBDD1Q8TEB9 315 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 ROBO4Q8WZ75 1007 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 GAL3ST4Q96RP7 486 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 CMSS1Q9BQ75 279 aaKnown RBP11.8□□□□□ -0.52
TRIM40-207ENST00000396581 NICN1Q9BSH3 213 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 NRSN2Q9GZP1 204 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 PBOV1Q9GZY1 135 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 SLC26A1Q9H2B4 701 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 TMEM231Q9H6L2 316 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 FANCFQ9NPI8 374 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 POMT1Q9Y6A1 747 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 ALPK2Q86TB3 2170 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 CACNA1CQ13936 2221 aa11.8□□□□□ -0.52
TRIM40-207ENST00000396581 PRSS44E7EML9 344 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 TAAR5O14804 337 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 SYT7O43581 403 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 ADAP1O75689 374 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 RPS2P15880 293 aaKnown RBP11.79□□□□□ -0.52
TRIM40-207ENST00000396581 HIST1H1DP16402 221 aaKnown RBP11.79□□□□□ -0.52
TRIM40-207ENST00000396581 IL11P20809 199 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 ZNF93P35789 620 aaPredicted RBP11.79□□□□□ -0.52
TRIM40-207ENST00000396581 EFNA3P52797 238 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 EIF5AP63241 154 aaKnown RBP11.79□□□□□ -0.52
TRIM40-207ENST00000396581 PLCXD2Q0VAA5 305 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 BTNL8Q6UX41 500 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.79□□□□□ -0.52
TRIM40-207ENST00000396581 MISPQ8IVT2 679 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 MAML2Q8IZL2 1156 aaPredicted RBP11.79□□□□□ -0.52
TRIM40-207ENST00000396581 BHLHE23Q8NDY6 225 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 OR10S1Q8NGN2 331 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 C2orf50Q96LR7 162 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 SCGB3A2Q96PL1 93 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 RTBDNQ9BSG5 229 aaPredicted RBP11.79□□□□□ -0.52
TRIM40-207ENST00000396581 WWTR1Q9GZV5 400 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 SEC61A2Q9H9S3 476 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 PISDQ9UG56 409 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 PI4KAP42356 2102 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 ASXL3Q9C0F0 2248 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 CDC14CA4D256 554 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 RHPN2P1A8MT19 583 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 RNASEK-C17orf49H0YIS7 233 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 PET100P0DJ07 73 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 GNALP38405 381 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 KCNJ3P48549 501 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 DHPSP49366 369 aaPredicted RBP11.79□□□□□ -0.52
TRIM40-207ENST00000396581 SULT1A2P50226 295 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 SHBQ15464 509 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 ANKRD55Q3KP44 614 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 EIF5AL1Q6IS14 154 aaKnown RBP11.79□□□□□ -0.52
TRIM40-207ENST00000396581 TMPRSS9Q7Z410 1059 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 MFSD8Q8NHS3 518 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 LYPD6BQ8NI32 183 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 SLAMF6Q96DU3 332 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 OR5B2Q96R09 309 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 MICU1Q9BPX6 476 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 CENPMQ9NSP4 180 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 ASH2LQ9UBL3 628 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 PILRBQ9UKJ0 227 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 OSGIN2Q9Y236 505 aa11.79□□□□□ -0.52
TRIM40-207ENST00000396581 IGHV5-51A0A0C4DH38 117 aa11.78□□□□□ -0.52
TRIM40-207ENST00000396581 TLCD2A6NGC4 264 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms