RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 SPRR3Q9UBC9 169 aa4□□□□□ -1.77
GABPB1-204ENST00000396464 ALG5Q9Y673 324 aa4□□□□□ -1.77
GABPB1-204ENST00000396464 CPDO75976 1380 aa4□□□□□ -1.77
GABPB1-204ENST00000396464 FLT4P35916 1363 aa4□□□□□ -1.77
GABPB1-204ENST00000396464 EPRSP07814 1512 aaKnown RBP3.99□□□□□ -1.77
GABPB1-204ENST00000396464 TSPOAP1O95153 1857 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 IGHV4OR15-8A0A075B7B6 117 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 E9PLD3 99 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 K7EQD1 137 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 IDH3BO43837 385 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 TRMUO75648 421 aaKnown RBP3.99□□□□□ -1.77
GABPB1-204ENST00000396464 GATBO75879 557 aaKnown RBP3.99□□□□□ -1.77
GABPB1-204ENST00000396464 DCTN3O75935 186 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 GLUD1P00367 558 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 PGA5P0DJD9 388 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 UCHL3P15374 230 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 ZNF17P17021 662 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 GDF1P27539 372 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 RPA3P35244 121 aaPredicted RBP3.99□□□□□ -1.77
GABPB1-204ENST00000396464 SSTR5P35346 364 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 BTDP43251 543 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 OR1D4P47884 311 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 OR12D2P58182 307 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 CLINT1Q14677 625 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 PTGES3Q15185 160 aaKnown RBP3.99□□□□□ -1.77
GABPB1-204ENST00000396464 RBMS2Q15434 407 aaKnown RBP3.99□□□□□ -1.77
GABPB1-204ENST00000396464 CEACAM21Q3KPI0 293 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 TTLL9Q3SXZ7 439 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 TFDP3Q5H9I0 405 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 WDR38Q5JTN6 314 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 CST9Q5W186 159 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 PTAR1Q7Z6K3 402 aaPredicted RBP3.99□□□□□ -1.77
GABPB1-204ENST00000396464 CARM1Q86X55 608 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 C10orf107Q8IVU9 208 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 LGI3Q8N145 548 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 C16orf52Q8NHV5 167 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 FRAT1Q92837 279 aaPredicted RBP3.99□□□□□ -1.77
GABPB1-204ENST00000396464 NABP1Q96AH0 204 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 FGGYQ96C11 551 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 CNRIP1Q96F85 164 aaPredicted RBP3.99□□□□□ -1.77
GABPB1-204ENST00000396464 MRAP2Q96G30 205 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 ZNF354BQ96LW1 612 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 P2RX4Q99571 388 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 TMEM109Q9BVC6 243 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 PITPNM3Q9BZ71 974 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 OR51B5Q9H339 312 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 MAP1LC3AQ9H492 121 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 SH2D2AQ9NP31 389 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 KCNJ16Q9NPI9 418 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 C12orf4Q9NQ89 552 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 XPNPEP1Q9NQW7 623 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 DDIT4Q9NX09 232 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 TAS2R13Q9NYV9 303 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 KCNIP1Q9NZI2 227 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 PSG11Q9UQ72 335 aa3.99□□□□□ -1.77
GABPB1-204ENST00000396464 CFAP74Q9C0B2 1584 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 NUP153P49790 1475 aaKnown RBP3.98□□□□□ -1.77
GABPB1-204ENST00000396464 IGHV1OR21-1A0A087WYE8 117 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 A0A0G2JLM5 398 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 FAM240AA0A1B0GVK7 77 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 A0A1W2PRG6 482 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 RBMY1BA6NDE4 496 aaKnown RBP3.98□□□□□ -1.77
GABPB1-204ENST00000396464 A6NDN8 102 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 RBMY1EA6NEQ0 496 aaKnown RBP3.98□□□□□ -1.77
GABPB1-204ENST00000396464 NXPH4O95158 308 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 CNIH1O95406 144 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 RBMY1DP0C7P1 496 aaKnown RBP3.98□□□□□ -1.77
GABPB1-204ENST00000396464 RBMY1A1P0DJD3 496 aaKnown RBP3.98□□□□□ -1.77
GABPB1-204ENST00000396464 PGA4P0DJD7 388 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 PGA3P0DJD8 388 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 IFNGR2P38484 337 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 PAX9P55771 341 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 TCL1AP56279 114 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 AP1S2P56377 157 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 SLC10A7Q0GE19 358 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 ATP6AP1Q15904 470 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 UBE2UQ5VVX9 321 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 FAM131AQ6UXB0 335 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 Q6ZVH6 145 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 TMEM179Q6ZVK1 233 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 TMED4Q7Z7H5 227 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 RDH10Q8IZV5 341 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 OR4K17Q8NGC6 315 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 OR10X1Q8NGY0 326 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 OR10J5Q8NHC4 309 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 PIFOQ8TCI5 191 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 CASTOR1Q8WTX7 329 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 DYDC1Q8WWB3 177 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 MAGEB18Q96M61 343 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 NODALQ96S42 347 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 TLNRD1Q9H1K6 362 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 UGT1A8Q9HAW9 530 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 TMEM9BQ9NQ34 198 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 FAM206AQ9NX38 181 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 PAK5Q9P286 719 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 TMEM181Q9P2C4 612 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 TP53TG1Q9Y2A0 90 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 NCOA3Q9Y6Q9 1424 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 ZNF532Q9HCE3 1301 aa3.98□□□□□ -1.77
GABPB1-204ENST00000396464 CACNA1FO60840 1977 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms