RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 DNAJC27Q9NZQ0 273 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 MRPL15Q9P015 296 aaKnown RBP7.36□□□□□ -1.23
ATG4A-205ENST00000394892 NUP50Q9UKX7 468 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 POMPQ9Y244 141 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 LRCH1Q9Y2L9 728 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 RHBDD3Q9Y3P4 386 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 MDFIC2A0A1B0GVS7 189 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 GGT3PA6NGU5 568 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 RIIAD1A6NNX1 92 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 ZNF878C9JN71 531 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 H3BN98 237 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 M0R129 80 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 LGALS8O00214 317 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 GSC2O15499 205 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 GMDSO60547 372 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 MITFO75030 526 aaPredicted RBP7.35□□□□□ -1.23
ATG4A-205ENST00000394892 PLATP00750 562 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 IFNGP01579 166 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 TFF1P04155 84 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 OSMP13725 252 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 MMP9P14780 707 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 ZNF3P17036 446 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 PITPNBP48739 271 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 GSK3AP49840 483 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 DAPP51397 102 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 CSNK2BP67870 215 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 CBX1P83916 185 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 EFNB1P98172 346 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 GK3PQ14409 553 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 PDLIM3Q53GG5 364 aaPredicted RBP7.35□□□□□ -1.23
ATG4A-205ENST00000394892 FAHD1Q6P587 224 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 DCDC5Q6ZRR9 648 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 FAM57BQ71RH2 274 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 FAM90A1Q86YD7 464 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 OTOSQ8NHW6 89 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 TEX47Q8TBZ9 253 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 ERGIC1Q969X5 290 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 PPP1R14AQ96A00 147 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 UPRTQ96BW1 309 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 REEP6Q96HR9 211 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 ZNF747Q9BV97 191 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 C1orf123Q9NWV4 160 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 RNF7Q9UBF6 113 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 MIOXQ9UGB7 285 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 DYSFO75923 2080 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 WNK2Q9Y3S1 2297 aa7.35□□□□□ -1.23
ATG4A-205ENST00000394892 IGHV3OR15-7A0A075B7D8 119 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 DNAJC9-AS1A6NH13 148 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 TMPRSS2O15393 492 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 TIPRLO75663 272 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 ANXA2P07355 339 aaKnown RBP7.34□□□□□ -1.23
ATG4A-205ENST00000394892 GRPP07492 148 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 SFTPBP07988 381 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 ALOX5APP20292 161 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 NAA10P41227 235 aaPredicted RBP7.34□□□□□ -1.23
ATG4A-205ENST00000394892 FGF12P61328 243 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 BNIP1Q12981 228 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 FLOT2Q14254 428 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 OR8B8Q15620 311 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 LRRN1Q6UXK5 716 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 C9orf139Q6ZV77 190 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 SPATA24Q86W54 205 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 BOLLQ8N9W6 283 aaKnown RBP7.34□□□□□ -1.23
ATG4A-205ENST00000394892 PLPP7Q8NBV4 271 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 BCAS4Q8TDM0 211 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 OTULINQ96BN8 352 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 ITPKCQ96DU7 683 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 LRGUKQ96M69 825 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 TBX15Q96SF7 602 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 NUDT16L1Q9BRJ7 211 aaKnown RBP7.34□□□□□ -1.23
ATG4A-205ENST00000394892 SLC25A19Q9HC21 320 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 BRD7Q9NPI1 651 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 DNAJB9Q9UBS3 223 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 OR5V1Q9UGF6 321 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 COPS3Q9UNS2 423 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 PCDHGB1Q9Y5G3 927 aa7.34□□□□□ -1.23
ATG4A-205ENST00000394892 LRRC30A6NM36 301 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 PRR23D1E9PI22 279 aaPredicted RBP7.33□□□□□ -1.24
ATG4A-205ENST00000394892 PSMD9O00233 223 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 PHYHO14832 338 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 MAGEB4O15481 346 aaPredicted RBP7.33□□□□□ -1.24
ATG4A-205ENST00000394892 GYG2O15488 501 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 TBX1O43435 398 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 XRCC2O43543 280 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 PRKYO43930 277 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 DNAJC8O75937 253 aaPredicted RBP7.33□□□□□ -1.24
ATG4A-205ENST00000394892 GYPAP02724 150 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 PRR23D2P0DMB1 279 aaPredicted RBP7.33□□□□□ -1.24
ATG4A-205ENST00000394892 PPIAL4GP0DN37 164 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 SELLP14151 372 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 CPT2P23786 658 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 BLVRAP53004 296 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 CRISP1P54107 249 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 GNB2P62879 340 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 GRB2P62993 217 aaKnown RBP7.33□□□□□ -1.24
ATG4A-205ENST00000394892 DEFA6Q01524 100 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 TAF13Q15543 124 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 SLC9A3R2Q15599 337 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 ARMCX4Q5H9R4 360 aa7.33□□□□□ -1.24
ATG4A-205ENST00000394892 DMRTC1Q5HYR2 192 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms