RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 S1PR1P21453 382 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 SULT1A1P50225 295 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 CD81P60033 236 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 ZP1P60852 638 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 RPL19P84098 196 aaKnown RBP5.11□□□□□ -1.59
RFFL-202ENST00000394597 DUSP2Q05923 314 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 SPEM2Q0P670 501 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 ECH1Q13011 328 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 TOMM34Q15785 309 aaPredicted RBP5.11□□□□□ -1.59
RFFL-202ENST00000394597 GUK1Q16774 197 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 PRSS53Q2L4Q9 553 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 RNLSQ5VYX0 342 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 SLC18B1Q6NT16 456 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 TEX19Q8NA77 164 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 TMEM52Q8NDY8 209 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 FNDC9Q8TBE3 224 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 UBL7Q96S82 380 aaPredicted RBP5.11□□□□□ -1.59
RFFL-202ENST00000394597 UTP23Q9BRU9 249 aaKnown RBP5.11□□□□□ -1.59
RFFL-202ENST00000394597 PLA2G12AQ9BZM1 189 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 ZNF160Q9HCG1 818 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 BOKQ9UMX3 212 aaPredicted RBP5.11□□□□□ -1.59
RFFL-202ENST00000394597 SCN3AQ9NY46 2000 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 TDRD6O60522 2096 aaKnown RBP5.11□□□□□ -1.59
RFFL-202ENST00000394597 TP53BP1Q12888 1972 aaPredicted RBP5.11□□□□□ -1.59
RFFL-202ENST00000394597 NOTCH4Q99466 2003 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 ELOA3CA0A087WX78 387 aaPredicted RBP5.11□□□□□ -1.59
RFFL-202ENST00000394597 C4orf47A7E2U8 309 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 SELENOFO60613 162 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 MT-CO3P00414 261 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 MT-ATP6P00846 226 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 CD14P08571 375 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 ZNF20P17024 532 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 AMY2BP19961 511 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 GALP22466 123 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 DPP4P27487 766 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 APOBEC1P41238 236 aaKnown RBP5.11□□□□□ -1.59
RFFL-202ENST00000394597 SLC6A9P48067 706 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 RRADP55042 308 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 CLDN6P56747 220 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 OR5I1Q13606 314 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 CRMP1Q14194 572 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 INPP5JQ15735 1006 aaPredicted RBP5.11□□□□□ -1.59
RFFL-202ENST00000394597 ZNF528Q3MIS6 628 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 TMEM176BQ3YBM2 270 aaPredicted RBP5.11□□□□□ -1.59
RFFL-202ENST00000394597 ZNF620Q6ZNG0 422 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 LANCL3Q6ZV70 420 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 ANKRD37Q7Z713 158 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 GABRG1Q8N1C3 465 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 OR4C3Q8NH37 302 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 SAP25Q8TEE9 199 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 EXTL1Q92935 676 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 LOXL4Q96JB6 756 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 TMEM74BQ9NUR3 256 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 FBXO34Q9NWN3 711 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 CEP250Q9BV73 2442 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 SEC16AO15027 2179 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 EP300Q09472 2414 aaPredicted RBP5.11□□□□□ -1.59
RFFL-202ENST00000394597 UNC13CQ8NB66 2214 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 ANKUB1A6NFN9 424 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 SLC16A7O60669 478 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 STK17BO94768 372 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 C1QCP02747 245 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 RPLP1P05386 114 aaKnown RBP5.11□□□□□ -1.59
RFFL-202ENST00000394597 GDF1P27539 372 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 CAV2P51636 162 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 ARG2P78540 354 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 EIF3IQ13347 325 aaKnown RBP5.11□□□□□ -1.59
RFFL-202ENST00000394597 SLC10A1Q14973 349 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 IQCJQ1A5X6 159 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 SLC36A2Q495M3 483 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 C1orf140Q5VVS0 124 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 DCAF12L2Q5VW00 463 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 FAM199XQ6PEV8 388 aaPredicted RBP5.11□□□□□ -1.59
RFFL-202ENST00000394597 C19orf48Q6RUI8 117 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 SEMA6DQ8NFY4 1073 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 NUDCD2Q8WVJ2 157 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 FAM46BQ96A09 425 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 TMEM106AQ96A25 262 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 LIN37Q96GY3 246 aaPredicted RBP5.11□□□□□ -1.59
RFFL-202ENST00000394597 IP6K3Q96PC2 410 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 ZNF587Q96SQ5 575 aaPredicted RBP5.11□□□□□ -1.59
RFFL-202ENST00000394597 TEAD3Q99594 435 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 ELOVL1Q9BW60 279 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 SAMD10Q9BYL1 202 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 GPR61Q9BZJ8 451 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 PATZ1Q9HBE1 687 aaKnown RBP5.11□□□□□ -1.59
RFFL-202ENST00000394597 OCIAD1Q9NX40 245 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 MOKQ9UQ07 419 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 K7ESF4 209 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 SYT7O43581 403 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 JTBO76095 146 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 TNFSF15O95150 251 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 MUC1P15941 1255 aaPredicted RBP5.1□□□□□ -1.59
RFFL-202ENST00000394597 FKBP2P26885 142 aaKnown RBP5.1□□□□□ -1.59
RFFL-202ENST00000394597 HOXC12P31275 282 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 CDX1P47902 265 aaPredicted RBP5.1□□□□□ -1.59
RFFL-202ENST00000394597 CYB561P49447 251 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 RASGEF1BQ0VAM2 473 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 FUT7Q11130 342 aa5.1□□□□□ -1.59
RFFL-202ENST00000394597 TGIF1Q15583 401 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms