RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 NUDT16L1Q9BRJ7 211 aaKnown RBP22■■□□□ 1.11
SHOX2-201ENST00000389589 RGCCQ9H4X1 137 aa22■■□□□ 1.11
SHOX2-201ENST00000389589 ZFHX2Q9C0A1 2572 aaPredicted RBP22■■□□□ 1.11
SHOX2-201ENST00000389589 IGKV1-9A0A0C4DH69 117 aa21.99■■□□□ 1.11
SHOX2-201ENST00000389589 C7orf66A4D0T2 115 aa21.99■■□□□ 1.11
SHOX2-201ENST00000389589 SLC22A20A6NK97 555 aa21.99■■□□□ 1.11
SHOX2-201ENST00000389589 TMEM14DPA8MWL7 114 aa21.99■■□□□ 1.11
SHOX2-201ENST00000389589 LPLP06858 475 aa21.99■■□□□ 1.11
SHOX2-201ENST00000389589 GSK3AP49840 483 aa21.99■■□□□ 1.11
SHOX2-201ENST00000389589 RRAS2P62070 204 aaPredicted RBP21.99■■□□□ 1.11
SHOX2-201ENST00000389589 PMP22Q01453 160 aa21.99■■□□□ 1.11
SHOX2-201ENST00000389589 SFRP4Q6FHJ7 346 aaPredicted RBP21.99■■□□□ 1.11
SHOX2-201ENST00000389589 PNLDC1Q8NA58 520 aaKnown RBP21.99■■□□□ 1.11
SHOX2-201ENST00000389589 SEMA6DQ8NFY4 1073 aa21.99■■□□□ 1.11
SHOX2-201ENST00000389589 REEP6Q96HR9 211 aa21.99■■□□□ 1.11
SHOX2-201ENST00000389589 GPER1Q99527 375 aa21.99■■□□□ 1.11
SHOX2-201ENST00000389589 COL25A1Q9BXS0 654 aaPredicted RBP21.99■■□□□ 1.11
SHOX2-201ENST00000389589 DMXL1Q9Y485 3027 aa21.99■■□□□ 1.11
SHOX2-201ENST00000389589 FAHP16930 419 aa21.99■■□□□ 1.11
SHOX2-201ENST00000389589 HGFACQ04756 655 aa21.99■■□□□ 1.11
SHOX2-201ENST00000389589 FAM189A2Q15884 450 aa21.99■■□□□ 1.11
SHOX2-201ENST00000389589 PABPC1L2AQ5JQF8 200 aa21.99■■□□□ 1.11
SHOX2-201ENST00000389589 GLIPR1L1Q6UWM5 242 aa21.99■■□□□ 1.11
SHOX2-201ENST00000389589 ZNF101Q8IZC7 436 aa21.99■■□□□ 1.11
SHOX2-201ENST00000389589 ITFG2Q969R8 447 aa21.99■■□□□ 1.11
SHOX2-201ENST00000389589 SPACA5Q96QH8 159 aa21.99■■□□□ 1.11
SHOX2-201ENST00000389589 KCNMB2Q9Y691 235 aa21.99■■□□□ 1.11
SHOX2-201ENST00000389589 GUCA2AQ02747 115 aa21.98■■□□□ 1.11
SHOX2-201ENST00000389589 KCNG3Q8TAE7 436 aa21.98■■□□□ 1.11
SHOX2-201ENST00000389589 SEH1LQ96EE3 360 aa21.98■■□□□ 1.11
SHOX2-201ENST00000389589 GAL3ST1Q99999 423 aa21.98■■□□□ 1.11
SHOX2-201ENST00000389589 MCUBQ9NWR8 336 aa21.98■■□□□ 1.11
SHOX2-201ENST00000389589 ZNF224Q9NZL3 707 aa21.98■■□□□ 1.11
SHOX2-201ENST00000389589 A0A0A6YYJ9 748 aa21.97■■□□□ 1.11
SHOX2-201ENST00000389589 TMEM255AQ5JRV8 349 aa21.97■■□□□ 1.11
SHOX2-201ENST00000389589 NUFIP2Q7Z417 695 aaKnown RBP21.97■■□□□ 1.11
SHOX2-201ENST00000389589 ACBD4Q8NC06 268 aa21.97■■□□□ 1.11
SHOX2-201ENST00000389589 C20orf85Q9H1P6 137 aa21.97■■□□□ 1.11
SHOX2-201ENST00000389589 GHRLQ9UBU3 117 aa21.97■■□□□ 1.11
SHOX2-201ENST00000389589 MYO7BQ6PIF6 2116 aa21.97■■□□□ 1.11
SHOX2-201ENST00000389589 RAB27BO00194 218 aa21.97■■□□□ 1.11
SHOX2-201ENST00000389589 OR3A4PP47883 348 aa21.97■■□□□ 1.11
SHOX2-201ENST00000389589 RIPPLY1Q0D2K3 151 aa21.97■■□□□ 1.11
SHOX2-201ENST00000389589 MOGAT2Q3SYC2 334 aa21.97■■□□□ 1.11
SHOX2-201ENST00000389589 PRDM14Q9GZV8 571 aa21.97■■□□□ 1.11
SHOX2-201ENST00000389589 TGM6O95932 706 aa21.96■■□□□ 1.11
SHOX2-201ENST00000389589 AKAIN1P0CW23 69 aa21.96■■□□□ 1.11
SHOX2-201ENST00000389589 KISS1Q15726 138 aa21.96■■□□□ 1.11
SHOX2-201ENST00000389589 UBE2V2Q15819 145 aa21.96■■□□□ 1.11
SHOX2-201ENST00000389589 ASCL5Q7RTU5 278 aa21.96■■□□□ 1.11
SHOX2-201ENST00000389589 GHITMQ9H3K2 345 aa21.96■■□□□ 1.11
SHOX2-201ENST00000389589 ZNF107Q9UII5 783 aaPredicted RBP21.96■■□□□ 1.11
SHOX2-201ENST00000389589 A8MV72 311 aaPredicted RBP21.95■■□□□ 1.11
SHOX2-201ENST00000389589 CHRM2P08172 466 aa21.95■■□□□ 1.11
SHOX2-201ENST00000389589 COX5BP10606 129 aa21.95■■□□□ 1.11
SHOX2-201ENST00000389589 AGTR1P30556 359 aa21.95■■□□□ 1.11
SHOX2-201ENST00000389589 ALDH3B1P43353 468 aa21.95■■□□□ 1.11
SHOX2-201ENST00000389589 FAPQ12884 760 aa21.95■■□□□ 1.11
SHOX2-201ENST00000389589 RNF144BQ7Z419 303 aa21.95■■□□□ 1.11
SHOX2-201ENST00000389589 OR2AE1Q8NHA4 323 aa21.95■■□□□ 1.11
SHOX2-201ENST00000389589 AQP3Q92482 292 aa21.95■■□□□ 1.11
SHOX2-201ENST00000389589 C1orf147Q96MC9 270 aaPredicted RBP21.95■■□□□ 1.11
SHOX2-201ENST00000389589 NEK6Q9HC98 313 aa21.95■■□□□ 1.11
SHOX2-201ENST00000389589 MOV10Q9HCE1 1003 aaKnown RBP21.95■■□□□ 1.11
SHOX2-201ENST00000389589 GTF2F2P13984 249 aa21.95■■□□□ 1.1
SHOX2-201ENST00000389589 GSG1Q2KHT4 349 aa21.95■■□□□ 1.1
SHOX2-201ENST00000389589 ZFP69Q49AA0 526 aa21.95■■□□□ 1.1
SHOX2-201ENST00000389589 C9orf135Q5VTT2 229 aa21.95■■□□□ 1.1
SHOX2-201ENST00000389589 RANGRFQ9HD47 186 aaPredicted RBP21.95■■□□□ 1.1
SHOX2-201ENST00000389589 GLRX2Q9NS18 164 aa21.95■■□□□ 1.1
SHOX2-201ENST00000389589 TNRC6AQ8NDV7 1962 aaKnown RBP21.95■■□□□ 1.1
SHOX2-201ENST00000389589 XRCC2O43543 280 aa21.94■■□□□ 1.1
SHOX2-201ENST00000389589 PEX14O75381 377 aa21.94■■□□□ 1.1
SHOX2-201ENST00000389589 ZNF260Q3ZCT1 412 aa21.94■■□□□ 1.1
SHOX2-201ENST00000389589 CPEB3Q8NE35 698 aaKnown RBP21.94■■□□□ 1.1
SHOX2-201ENST00000389589 C1QTNF5Q9BXJ0 243 aa21.94■■□□□ 1.1
SHOX2-201ENST00000389589 ING3Q9NXR8 418 aa21.94■■□□□ 1.1
SHOX2-201ENST00000389589 A0A096LPE4 126 aa21.94■■□□□ 1.1
SHOX2-201ENST00000389589 A0A1W2PPZ6 126 aa21.94■■□□□ 1.1
SHOX2-201ENST00000389589 PRAF2O60831 178 aa21.94■■□□□ 1.1
SHOX2-201ENST00000389589 ARR3P36575 388 aa21.94■■□□□ 1.1
SHOX2-201ENST00000389589 TAS2R19P59542 299 aa21.94■■□□□ 1.1
SHOX2-201ENST00000389589 CD83Q01151 205 aa21.94■■□□□ 1.1
SHOX2-201ENST00000389589 P4HA3Q7Z4N8 544 aa21.94■■□□□ 1.1
SHOX2-201ENST00000389589 FGD2Q7Z6J4 655 aa21.94■■□□□ 1.1
SHOX2-201ENST00000389589 DPPA2Q7Z7J5 298 aa21.94■■□□□ 1.1
SHOX2-201ENST00000389589 MED12LQ86YW9 2145 aa21.94■■□□□ 1.1
SHOX2-201ENST00000389589 TCTE3Q8IZS6 198 aa21.94■■□□□ 1.1
SHOX2-201ENST00000389589 ZBTB8BQ8NAP8 495 aaPredicted RBP21.94■■□□□ 1.1
SHOX2-201ENST00000389589 TMEM229BQ8NBD8 167 aa21.94■■□□□ 1.1
SHOX2-201ENST00000389589 OR4C16Q8NGL9 310 aa21.94■■□□□ 1.1
SHOX2-201ENST00000389589 SPSB1Q96BD6 273 aa21.94■■□□□ 1.1
SHOX2-201ENST00000389589 GMPPAQ96IJ6 420 aaPredicted RBP21.94■■□□□ 1.1
SHOX2-201ENST00000389589 MED28Q9H204 178 aa21.94■■□□□ 1.1
SHOX2-201ENST00000389589 AQP7O14520 342 aa21.93■■□□□ 1.1
SHOX2-201ENST00000389589 CDC14BO60729 498 aa21.93■■□□□ 1.1
SHOX2-201ENST00000389589 MELTFP08582 738 aa21.93■■□□□ 1.1
SHOX2-201ENST00000389589 PTGFRP43088 359 aa21.93■■□□□ 1.1
SHOX2-201ENST00000389589 Q6ZTK2 550 aa21.93■■□□□ 1.1
SHOX2-201ENST00000389589 ZADH2Q8N4Q0 377 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms