RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 OR10A2Q9H208 303 aa7.82□□□□□ -1.16
HMGN1-202ENST00000380747 NIPAL2Q9H841 368 aa7.82□□□□□ -1.16
HMGN1-202ENST00000380747 HAO2Q9NYQ3 351 aa7.82□□□□□ -1.16
HMGN1-202ENST00000380747 LRP12Q9Y561 859 aa7.82□□□□□ -1.16
HMGN1-202ENST00000380747 LOC100130705A0A1B0GUX0 176 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 MEGF11A6BM72 1044 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 PRR32B1ATL7 298 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 CLDN25C9JDP6 229 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 F5H5P2 479 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 PHYHO14832 338 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 MAGEB4O15481 346 aaPredicted RBP7.81□□□□□ -1.16
HMGN1-202ENST00000380747 MLNRO43193 412 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 CD5LO43866 347 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 HLA-DPB1P04440 258 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 TACSTD2P09758 323 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 SBK2P0C263 348 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 IGHV4-31P0DP07 118 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 TNFRSF1AP19438 455 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 CA6P23280 308 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 IL2RGP31785 369 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 SRP9P49458 86 aaKnown RBP7.81□□□□□ -1.16
HMGN1-202ENST00000380747 GZMKP49863 264 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 RIDAP52758 137 aaKnown RBP7.81□□□□□ -1.16
HMGN1-202ENST00000380747 CXCR4P61073 352 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 HNRNPA0Q13151 305 aaKnown RBP7.81□□□□□ -1.16
HMGN1-202ENST00000380747 OR8G1Q15617 311 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 ZNF322Q6U7Q0 402 aaPredicted RBP7.81□□□□□ -1.16
HMGN1-202ENST00000380747 ZNF771Q7L3S4 317 aaPredicted RBP7.81□□□□□ -1.16
HMGN1-202ENST00000380747 PRSS45Q7RTY3 260 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 ZNF679Q8IYX0 411 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 ZNF555Q8NEP9 628 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 OR10H4Q8NGA5 316 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 OR56B2PQ8NGI1 322 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 TRUB1Q8WWH5 349 aaKnown RBP7.81□□□□□ -1.16
HMGN1-202ENST00000380747 RAB1CQ92928 201 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 TIMD4Q96H15 378 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 MEGF10Q96KG7 1140 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 OR2V2Q96R30 315 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 OR8B4Q96RC9 309 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 APOL4Q9BPW4 351 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 OPA3Q9H6K4 179 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 FAM118AQ9NWS6 357 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 CLN6Q9NWW5 311 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 ZNF319Q9P2F9 582 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 AASSQ9UDR5 926 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 IL19Q9UHD0 177 aa7.81□□□□□ -1.16
HMGN1-202ENST00000380747 POLR3KQ9Y2Y1 108 aaPredicted RBP7.81□□□□□ -1.16
HMGN1-202ENST00000380747 TMEM269A0A1B0GVZ9 245 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 ISPDA4D126 451 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 ANKRD30BLA7E2S9 258 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 E9PQ18 207 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 WNT9BO14905 357 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 ZNF254O75437 659 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 OR2T7P0C7T2 308 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 CFL1P23528 166 aaKnown RBP7.8□□□□□ -1.16
HMGN1-202ENST00000380747 PEX2P28328 305 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 RBMXP38159 391 aaKnown RBP7.8□□□□□ -1.16
HMGN1-202ENST00000380747 DDOSTP39656 456 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 MTNR1AP48039 350 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 SNRPGP62308 76 aaKnown RBP7.8□□□□□ -1.16
HMGN1-202ENST00000380747 FAM3AP98173 230 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 ROM1Q03395 351 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 SLC3A1Q07837 685 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 TMED1Q13445 227 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 ZNF829Q3KNS6 432 aaPredicted RBP7.8□□□□□ -1.16
HMGN1-202ENST00000380747 MEDAGQ5VYS4 303 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 DEGS2Q6QHC5 323 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 PEG10Q86TG7 708 aaKnown RBP7.8□□□□□ -1.16
HMGN1-202ENST00000380747 MOGAT3Q86VF5 341 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 COMMD2Q86X83 199 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 YIPF7Q8N8F6 280 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 OR8B12Q8NGG6 310 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 OR2T27Q8NH04 317 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 CLDND2Q8NHS1 167 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 DVL3Q92997 716 aaPredicted RBP7.8□□□□□ -1.16
HMGN1-202ENST00000380747 SPSB4Q96A44 273 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 RNFT2Q96EX2 444 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 ADAT1Q9BUB4 502 aaKnown RBP7.8□□□□□ -1.16
HMGN1-202ENST00000380747 RGCCQ9H4X1 137 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 TMEM106BQ9NUM4 274 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 DCAF16Q9NXF7 216 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 SMPD3Q9NY59 655 aaPredicted RBP7.8□□□□□ -1.16
HMGN1-202ENST00000380747 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.8□□□□□ -1.16
HMGN1-202ENST00000380747 GTF2A1LQ9UNN4 478 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 PPP1R3CQ9UQK1 317 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 NOP16Q9Y3C1 178 aaKnown RBP7.8□□□□□ -1.16
HMGN1-202ENST00000380747 WIPI2Q9Y4P8 454 aa7.8□□□□□ -1.16
HMGN1-202ENST00000380747 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.8□□□□□ -1.164e-11■■■■■ 27.5
HMGN1-202ENST00000380747 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.79□□□□□ -1.16
HMGN1-202ENST00000380747 hCG_38984A0A1B0GV85 526 aa7.79□□□□□ -1.16
HMGN1-202ENST00000380747 A0A1W2PQL4 384 aaPredicted RBP7.79□□□□□ -1.16
HMGN1-202ENST00000380747 ACOD1A6NK06 481 aa7.79□□□□□ -1.16
HMGN1-202ENST00000380747 SNTNA6NMZ2 147 aa7.79□□□□□ -1.16
HMGN1-202ENST00000380747 A8MV72 311 aaPredicted RBP7.79□□□□□ -1.16
HMGN1-202ENST00000380747 LOC110117498-PIK3R3F6TDL0 507 aa7.79□□□□□ -1.16
HMGN1-202ENST00000380747 F8W735 103 aaPredicted RBP7.79□□□□□ -1.16
HMGN1-202ENST00000380747 TMPRSS2O15393 492 aa7.79□□□□□ -1.16
HMGN1-202ENST00000380747 MPZL2O60487 215 aa7.79□□□□□ -1.16
HMGN1-202ENST00000380747 RPP14O95059 124 aaKnown RBP7.79□□□□□ -1.16
HMGN1-202ENST00000380747 ALX3O95076 343 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms