RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 OR2A7Q96R45 310 aa17.08■□□□□ 0.33
SSU72-204ENST00000378726 DEFB127Q9H1M4 99 aa17.08■□□□□ 0.33
SSU72-204ENST00000378726 ACKR4Q9NPB9 350 aa17.08■□□□□ 0.33
SSU72-204ENST00000378726 CSAG2Q9Y5P2 127 aa17.08■□□□□ 0.33
SSU72-204ENST00000378726 FAM186AA6NE01 2351 aa17.08■□□□□ 0.32
SSU72-204ENST00000378726 CEP250Q9BV73 2442 aa17.08■□□□□ 0.32
SSU72-204ENST00000378726 LOC107986453A0A1B0GWG9 222 aa17.08■□□□□ 0.32
SSU72-204ENST00000378726 hCG_1807616A0A1W2PRN6 198 aa17.08■□□□□ 0.32
SSU72-204ENST00000378726 PYCARD-AS1I3L0S3 204 aa17.08■□□□□ 0.32
SSU72-204ENST00000378726 IL5P05113 134 aa17.08■□□□□ 0.32
SSU72-204ENST00000378726 UBCP0CG48 685 aaKnown RBP17.08■□□□□ 0.32
SSU72-204ENST00000378726 RAP2BP61225 183 aa17.08■□□□□ 0.32
SSU72-204ENST00000378726 MRPS10P82664 201 aaKnown RBP17.08■□□□□ 0.32
SSU72-204ENST00000378726 BAMBIQ13145 260 aa17.08■□□□□ 0.32
SSU72-204ENST00000378726 ENDOGQ14249 297 aaKnown RBP17.08■□□□□ 0.32
SSU72-204ENST00000378726 GJC3Q8NFK1 279 aa17.08■□□□□ 0.32
SSU72-204ENST00000378726 OR13C3Q8NGS6 347 aa17.08■□□□□ 0.32
SSU72-204ENST00000378726 CRLF2Q9HC73 371 aa17.08■□□□□ 0.32
SSU72-204ENST00000378726 GPN1Q9HCN4 374 aaPredicted RBP17.08■□□□□ 0.32
SSU72-204ENST00000378726 ZFHX4Q86UP3 3567 aa17.08■□□□□ 0.32
SSU72-204ENST00000378726 TUBAL3A6NHL2 446 aa17.07■□□□□ 0.32
SSU72-204ENST00000378726 TTRP02766 147 aa17.07■□□□□ 0.32
SSU72-204ENST00000378726 ATF4P18848 351 aaPredicted RBP17.07■□□□□ 0.32
SSU72-204ENST00000378726 MECP2P51608 486 aaKnown RBP17.07■□□□□ 0.32
SSU72-204ENST00000378726 C2orf68Q2NKX9 166 aa17.07■□□□□ 0.32
SSU72-204ENST00000378726 DEFB109BQ30KR1 87 aa17.07■□□□□ 0.32
SSU72-204ENST00000378726 GPR137CQ8N3F9 429 aa17.07■□□□□ 0.32
SSU72-204ENST00000378726 SNRPGP15A8MWD9 76 aa17.06■□□□□ 0.32
SSU72-204ENST00000378726 SIX6O95475 246 aa17.06■□□□□ 0.32
SSU72-204ENST00000378726 MNDAP41218 407 aa17.06■□□□□ 0.32
SSU72-204ENST00000378726 ASPHD2Q6ICH7 369 aa17.06■□□□□ 0.32
SSU72-204ENST00000378726 PLXDC2Q6UX71 529 aa17.06■□□□□ 0.32
SSU72-204ENST00000378726 CXorf58Q96LI9 332 aa17.06■□□□□ 0.32
SSU72-204ENST00000378726 LINC00052Q96N35 136 aa17.06■□□□□ 0.32
SSU72-204ENST00000378726 MRI1Q9BV20 369 aa17.06■□□□□ 0.32
SSU72-204ENST00000378726 LDAHQ9H6V9 325 aa17.06■□□□□ 0.32
SSU72-204ENST00000378726 ETV7Q9Y603 341 aa17.06■□□□□ 0.32
SSU72-204ENST00000378726 KCNMB2Q9Y691 235 aa17.06■□□□□ 0.32
SSU72-204ENST00000378726 C4BPBP20851 252 aa17.06■□□□□ 0.32
SSU72-204ENST00000378726 MRPS34P82930 218 aaKnown RBP17.06■□□□□ 0.32
SSU72-204ENST00000378726 RNFT1Q5M7Z0 435 aa17.06■□□□□ 0.32
SSU72-204ENST00000378726 TMPRSS13Q9BYE2 586 aa17.06■□□□□ 0.32
SSU72-204ENST00000378726 PPA2Q9H2U2 334 aa17.06■□□□□ 0.32
SSU72-204ENST00000378726 SDHAF2Q9NX18 166 aa17.06■□□□□ 0.32
SSU72-204ENST00000378726 CKLFQ9UBR5 152 aa17.06■□□□□ 0.32
SSU72-204ENST00000378726 SYNGR4O95473 234 aa17.05■□□□□ 0.32
SSU72-204ENST00000378726 HLXQ14774 488 aaPredicted RBP17.05■□□□□ 0.32
SSU72-204ENST00000378726 FAM27BQ5VT28 67 aa17.05■□□□□ 0.32
SSU72-204ENST00000378726 DNM1P46Q6ZS02 220 aa17.05■□□□□ 0.32
SSU72-204ENST00000378726 SLC36A1Q7Z2H8 476 aa17.05■□□□□ 0.32
SSU72-204ENST00000378726 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.05■□□□□ 0.32
SSU72-204ENST00000378726 SLC5A6Q9Y289 635 aa17.05■□□□□ 0.32
SSU72-204ENST00000378726 LIPGQ9Y5X9 500 aa17.05■□□□□ 0.32
SSU72-204ENST00000378726 LOC400499M0QZD8 3231 aa17.05■□□□□ 0.32
SSU72-204ENST00000378726 MFSD2BA6NFX1 497 aa17.05■□□□□ 0.32
SSU72-204ENST00000378726 OR6C65A6NJZ3 312 aa17.05■□□□□ 0.32
SSU72-204ENST00000378726 ZNF891A8MT65 544 aaPredicted RBP17.05■□□□□ 0.32
SSU72-204ENST00000378726 ACTL6AO96019 429 aa17.05■□□□□ 0.32
SSU72-204ENST00000378726 HOXD4P09016 255 aaPredicted RBP17.05■□□□□ 0.32
SSU72-204ENST00000378726 SLC2A1P11166 492 aa17.05■□□□□ 0.32
SSU72-204ENST00000378726 ZNF121P58317 390 aaPredicted RBP17.05■□□□□ 0.32
SSU72-204ENST00000378726 GRB2P62993 217 aaKnown RBP17.05■□□□□ 0.32
SSU72-204ENST00000378726 PCGF3Q3KNV8 242 aa17.05■□□□□ 0.32
SSU72-204ENST00000378726 OR4D10Q8NGI6 311 aa17.05■□□□□ 0.32
SSU72-204ENST00000378726 CPT1CQ8TCG5 803 aa17.05■□□□□ 0.32
SSU72-204ENST00000378726 PRRG4Q9BZD6 226 aa17.05■□□□□ 0.32
SSU72-204ENST00000378726 EXO5Q9H790 373 aa17.05■□□□□ 0.32
SSU72-204ENST00000378726 TAS2R4Q9NYW5 299 aa17.05■□□□□ 0.32
SSU72-204ENST00000378726 MCTS1Q9ULC4 181 aaKnown RBP17.05■□□□□ 0.32
SSU72-204ENST00000378726 NOSIPQ9Y314 301 aaKnown RBP17.05■□□□□ 0.32
SSU72-204ENST00000378726 CUL9Q8IWT3 2517 aa17.05■□□□□ 0.32
SSU72-204ENST00000378726 ZNF407Q9C0G0 2248 aa17.05■□□□□ 0.32
SSU72-204ENST00000378726 IGKV3D-15A0A087WSY6 115 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 SYT7O43581 403 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 LMX1BO60663 402 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 IGFBP3P17936 291 aaPredicted RBP17.04■□□□□ 0.32
SSU72-204ENST00000378726 UBE2MP61081 183 aaKnown RBP17.04■□□□□ 0.32
SSU72-204ENST00000378726 RGS7BPQ6MZT1 257 aaPredicted RBP17.04■□□□□ 0.32
SSU72-204ENST00000378726 IGFL2Q6UWQ7 119 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 ZNF283Q8N7M2 679 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 OR4C16Q8NGL9 310 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 FBXO17Q96EF6 278 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 ALKBH3Q96Q83 286 aaPredicted RBP17.04■□□□□ 0.32
SSU72-204ENST00000378726 POM121CA8CG34 1229 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 ARPC5O15511 151 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 MRPL33O75394 65 aaKnown RBP17.04■□□□□ 0.32
SSU72-204ENST00000378726 CX3CR1P49238 355 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 EFNB2P52799 333 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 H2BFSP57053 126 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 SEC61A1P61619 476 aaKnown RBP17.04■□□□□ 0.32
SSU72-204ENST00000378726 HIST1H3AP68431 136 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 C3AR1Q16581 482 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 HIST2H3PS2Q5TEC6 136 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 ALKAL2Q6UX46 152 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 HIST2H3AQ71DI3 136 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 COQ8AQ8NI60 647 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 FNDC9Q8TBE3 224 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 OR51E1Q8TCB6 317 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 TMEM45BQ96B21 275 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 FGGYQ96C11 551 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms