RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 OGG1O15527 345 aa11.75□□□□□ -0.53
PRPF18-202ENST00000378572 PLPP2O43688 288 aa11.75□□□□□ -0.53
PRPF18-202ENST00000378572 LILRA1O75019 489 aa11.75□□□□□ -0.53
PRPF18-202ENST00000378572 OPRL1P41146 370 aa11.75□□□□□ -0.53
PRPF18-202ENST00000378572 GPR6P46095 362 aaPredicted RBP11.75□□□□□ -0.53
PRPF18-202ENST00000378572 RIDAP52758 137 aaKnown RBP11.75□□□□□ -0.53
PRPF18-202ENST00000378572 TMBIM6P55061 237 aa11.75□□□□□ -0.53
PRPF18-202ENST00000378572 PCBD1P61457 104 aa11.75□□□□□ -0.53
PRPF18-202ENST00000378572 RAB1AP62820 205 aa11.75□□□□□ -0.53
PRPF18-202ENST00000378572 ALKBH6Q3KRA9 238 aa11.75□□□□□ -0.53
PRPF18-202ENST00000378572 TIMM50Q3ZCQ8 353 aa11.75□□□□□ -0.53
PRPF18-202ENST00000378572 GPR107Q5VW38 600 aa11.75□□□□□ -0.53
PRPF18-202ENST00000378572 FDX2Q6P4F2 183 aa11.75□□□□□ -0.53
PRPF18-202ENST00000378572 RPL22L1Q6P5R6 122 aaKnown RBP11.75□□□□□ -0.53
PRPF18-202ENST00000378572 KRT77Q7Z794 578 aa11.75□□□□□ -0.53
PRPF18-202ENST00000378572 GLCCI1Q86VQ1 547 aa11.75□□□□□ -0.53
PRPF18-202ENST00000378572 YIPF7Q8N8F6 280 aa11.75□□□□□ -0.53
PRPF18-202ENST00000378572 RAB2BQ8WUD1 216 aa11.75□□□□□ -0.53
PRPF18-202ENST00000378572 SLAMF6Q96DU3 332 aa11.75□□□□□ -0.53
PRPF18-202ENST00000378572 OR51B6Q9H340 312 aa11.75□□□□□ -0.53
PRPF18-202ENST00000378572 OCEL1Q9H607 264 aa11.75□□□□□ -0.53
PRPF18-202ENST00000378572 NIPAL2Q9H841 368 aa11.75□□□□□ -0.53
PRPF18-202ENST00000378572 ACOXLQ9NUZ1 547 aa11.75□□□□□ -0.53
PRPF18-202ENST00000378572 ENPP5Q9UJA9 477 aa11.75□□□□□ -0.53
PRPF18-202ENST00000378572 ZNF878C9JN71 531 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 GABARAPO95166 117 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 SCRN3Q0VDG4 424 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 CDK5R1Q15078 307 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 NKPD1Q17RQ9 610 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 LIPKQ5VXJ0 399 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 FOXB2Q5VYV0 432 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 DMKNQ6E0U4 476 aaPredicted RBP11.74□□□□□ -0.53
PRPF18-202ENST00000378572 CORO6Q6QEF8 472 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 LRRN1Q6UXK5 716 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 CFAP77Q6ZQR2 320 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 DPPA2Q7Z7J5 298 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 OR10S1Q8NGN2 331 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 KCNN2Q9H2S1 579 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 MS4A5Q9H3V2 200 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 ELOVL3Q9HB03 270 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 PNRC2Q9NPJ4 139 aaKnown RBP11.74□□□□□ -0.53
PRPF18-202ENST00000378572 DDX28Q9NUL7 540 aaKnown RBP11.74□□□□□ -0.53
PRPF18-202ENST00000378572 B3GNT2Q9NY97 397 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 FBXL3Q9UKT7 428 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 E9PI62 339 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 MAGEB4O15481 346 aaPredicted RBP11.74□□□□□ -0.53
PRPF18-202ENST00000378572 PATE4P0C8F1 98 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 ZNF14P17017 642 aaPredicted RBP11.74□□□□□ -0.53
PRPF18-202ENST00000378572 CELP19835 753 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 PSMA1P25786 263 aaKnown RBP11.74□□□□□ -0.53
PRPF18-202ENST00000378572 GABRA5P31644 462 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 GLRXP35754 106 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 RIN1Q13671 783 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 GDPGP1Q6ZNW5 385 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 SLC16A12Q6ZSM3 486 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 LRRC18Q8N456 261 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 RNF166Q96A37 237 aaPredicted RBP11.74□□□□□ -0.53
PRPF18-202ENST00000378572 SMIM19Q96E16 107 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 RNF121Q9H920 327 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 RSL24D1Q9UHA3 163 aaKnown RBP11.74□□□□□ -0.53
PRPF18-202ENST00000378572 SF3B6Q9Y3B4 125 aaKnown RBP11.74□□□□□ -0.53
PRPF18-202ENST00000378572 LRP12Q9Y561 859 aa11.74□□□□□ -0.53
PRPF18-202ENST00000378572 SVEP1Q4LDE5 3571 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 PSMD9O00233 223 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 RER1O15258 196 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 PPIHO43447 177 aaKnown RBP11.73□□□□□ -0.53
PRPF18-202ENST00000378572 NOL3O60936 208 aaKnown RBP11.73□□□□□ -0.53
PRPF18-202ENST00000378572 H2BFMP0C1H6 154 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 FAM157BP0CG42 384 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 NAT2P11245 290 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 CCR9P51686 369 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 GTF2A1P52655 376 aaPredicted RBP11.73□□□□□ -0.53
PRPF18-202ENST00000378572 SELENOVP59797 346 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 GRB2P62993 217 aaKnown RBP11.73□□□□□ -0.53
PRPF18-202ENST00000378572 TRAM1Q15629 374 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 MSMPQ1L6U9 139 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 SLC36A2Q495M3 483 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 SLC16A14Q7RTX9 510 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 LRP11Q86VZ4 500 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 SKA3Q8IX90 412 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 RDH5Q92781 318 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 ISOC1Q96CN7 298 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 C1orf159Q96HA4 380 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 COQ7Q99807 217 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 SH3GL3Q99963 347 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 HDHD2Q9H0R4 259 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 CDH20Q9HBT6 801 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 ATPIF1Q9UII2 106 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 GRIP1Q9Y3R0 1128 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 TIMM10BQ9Y5J6 103 aa11.73□□□□□ -0.53
PRPF18-202ENST00000378572 SIRT4Q9Y6E7 314 aaPredicted RBP11.73□□□□□ -0.53
PRPF18-202ENST00000378572 CCDC160A6NGH7 325 aa11.72□□□□□ -0.53
PRPF18-202ENST00000378572 B4DSR2 109 aa11.72□□□□□ -0.53
PRPF18-202ENST00000378572 SRSF10O75494 262 aaKnown RBP11.72□□□□□ -0.53
PRPF18-202ENST00000378572 HPXP02790 462 aa11.72□□□□□ -0.53
PRPF18-202ENST00000378572 MMP7P09237 267 aaPredicted RBP11.72□□□□□ -0.53
PRPF18-202ENST00000378572 ZNF35P13682 527 aa11.72□□□□□ -0.53
PRPF18-202ENST00000378572 ZNF32P17041 273 aa11.72□□□□□ -0.53
PRPF18-202ENST00000378572 GALP22466 123 aa11.72□□□□□ -0.53
PRPF18-202ENST00000378572 EVX1P49640 407 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms