RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 FOXN4Q96NZ1 517 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 SMG9Q9H0W8 520 aaKnown RBP10.63□□□□□ -0.71
NPHP4-202ENST00000378161 PLK3Q9H4B4 646 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 BARX1Q9HBU1 254 aaPredicted RBP10.63□□□□□ -0.71
NPHP4-202ENST00000378161 SPHK2Q9NRA0 654 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 LHX6Q9UPM6 363 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 FUT9Q9Y231 359 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 LAMTOR2Q9Y2Q5 125 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 GOLGB1Q14789 3259 aaKnown RBP10.63□□□□□ -0.71
NPHP4-202ENST00000378161 SHROOM3Q8TF72 1996 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 GAGE10A6NGK3 116 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 OR4A8P0C604 315 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 WNT5AP41221 380 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 LIMS1P48059 325 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 LEG1Q6P5S2 330 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 TMEM123Q8N131 208 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 OR4K15Q8NH41 348 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 ADAMTS17Q8TE56 1095 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 Q8WTZ3 238 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 TSLPQ969D9 159 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 TMEM186Q96B77 213 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 LMLNQ96KR4 655 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 ARHGDIGQ99819 225 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 MOB1AQ9H8S9 216 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 RALYQ9UKM9 306 aaKnown RBP10.63□□□□□ -0.71
NPHP4-202ENST00000378161 FOXJ3Q9UPW0 622 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 ZNFX1Q9P2E3 1918 aaKnown RBP10.63□□□□□ -0.71
NPHP4-202ENST00000378161 SSC5DA1L4H1 1573 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 BCAT2O15382 392 aaPredicted RBP10.63□□□□□ -0.71
NPHP4-202ENST00000378161 HAND1O96004 215 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 C17orf99Q6UX52 265 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 RNF175Q8N4F7 328 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 SF3B5Q9BWJ5 86 aaKnown RBP10.63□□□□□ -0.71
NPHP4-202ENST00000378161 CST9LQ9H4G1 147 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 B3GAT1Q9P2W7 334 aa10.63□□□□□ -0.71
NPHP4-202ENST00000378161 SCN1AP35498 2009 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 A0A087WUJ7 227 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 SEMA4FO95754 770 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 HLA-GP17693 338 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 SLC6A6P31641 620 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 SLC7A9P82251 487 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 HIST3H3Q16695 136 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 AMZ1Q400G9 498 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 MMP21Q8N119 569 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 IL22RA1Q8N6P7 574 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 SLC38A9Q8NBW4 561 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 MVB12AQ96EY5 273 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 TEAD3Q99594 435 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 DICER1Q9UPY3 1922 aaKnown RBP10.62□□□□□ -0.71
NPHP4-202ENST00000378161 C1orf226A1L170 272 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 LRP5LA4QPB2 252 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 PDE6DO43924 150 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 PGFP49763 221 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 HMGA2P52926 109 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 UCP3P55916 312 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 IL10RAQ13651 578 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 CNN3Q15417 329 aaKnown RBP10.62□□□□□ -0.71
NPHP4-202ENST00000378161 SLC8B1Q6J4K2 584 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.62□□□□□ -0.71
NPHP4-202ENST00000378161 OR5AC2Q9NZP5 309 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 A0A0U1RQK1 487 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 ZFP92A6NM28 416 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 MELTFP08582 738 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 MMP16P51512 607 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 SSBP1Q04837 148 aaKnown RBP10.62□□□□□ -0.71
NPHP4-202ENST00000378161 TMEM267Q0VDI3 215 aaPredicted RBP10.62□□□□□ -0.71
NPHP4-202ENST00000378161 SLAQ13239 276 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 SQSTM1Q13501 440 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 C2orf68Q2NKX9 166 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 TMEM99Q8N816 258 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 NUP43Q8NFH3 380 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 OR4N2Q8NGD1 307 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 OR5AK2Q8NH90 309 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 C2orf50Q96LR7 162 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 TPSD1Q9BZJ3 242 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 CHST6Q9GZX3 395 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 TRAPPC1Q9Y5R8 145 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 FOCADQ5VW36 1801 aa10.62□□□□□ -0.71
NPHP4-202ENST00000378161 ANTXRLA6NF34 631 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 TLCD2A6NGC4 264 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 G3V3Q6 166 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 CD8AP01732 235 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 STATHP02808 62 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 CD1CP29017 333 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 ZNF266Q14584 549 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 ZNF101Q8IZC7 436 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 GRHL3Q8TE85 626 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 PRRC1Q96M27 445 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 PLEKHA2Q9HB19 425 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 PLSCR2Q9NRY7 297 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 TRAV30A0A087WSZ9 112 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 TRAV39A0A0B4J263 110 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 KNG1P01042 644 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 KLKB1P03952 638 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 ACRP10323 421 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 FOLR1P15328 257 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 CAPZBP47756 277 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 CKS1BP61024 79 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 OR5AU1Q8NGC0 362 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 ALKBH3Q96Q83 286 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms