RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 HCRTR1O43613 425 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 DFFBO76075 338 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 IGHV4-34P06331 123 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 FCGR3AP08637 254 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 MRPL3P09001 348 aaKnown RBP13.87□□□□□ -0.19
FXN-201ENST00000377270 CT62P0C5K7 136 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 PGA3P0DJD8 388 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 DPP4P27487 766 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 GABRA3P34903 492 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 DVL1P1P54792 670 aaPredicted RBP13.87□□□□□ -0.19
FXN-201ENST00000377270 ZNF85Q03923 595 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 PRICKLE4Q2TBC4 344 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 PRPF38BQ5VTL8 546 aaKnown RBP13.87□□□□□ -0.19
FXN-201ENST00000377270 RNF44Q7L0R7 432 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 CA13Q8N1Q1 262 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 SLC35G3Q8N808 338 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 RNASEH2CQ8TDP1 164 aaKnown RBP13.87□□□□□ -0.19
FXN-201ENST00000377270 PIK3IP1Q96FE7 263 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 INTS14Q96SY0 518 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 PRSS27Q9BQR3 290 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 HCAR1Q9BXC0 346 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 MMP17Q9ULZ9 603 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 ADAM18Q9Y3Q7 739 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 A0A087WV62 115 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 TRGC2P03986 189 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 NID1P14543 1247 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 FUT1P19526 365 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 ZNF616Q08AN1 781 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 SLC9A3R2Q15599 337 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 OR1Q1Q15612 314 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 SLC30A7Q8NEW0 376 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 PGAM5Q96HS1 289 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 DPH1Q9BZG8 443 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 PLEKHA2Q9HB19 425 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 GON4LQ3T8J9 2241 aa13.87□□□□□ -0.19
FXN-201ENST00000377270 KIR2DS5A0A0G2JLQ3 304 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 A0A0G2JNG1 304 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 GXYLT2A0PJZ3 443 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 KIR2DS3K7RE56 304 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 CST2P09228 141 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 TRGC1P0CF51 173 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 SLC25A4P12235 298 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 RAB7AP51149 207 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 PAX5Q02548 391 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 KIR2DS5Q14953 304 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 MRPL52Q86TS9 123 aaKnown RBP13.86□□□□□ -0.19
FXN-201ENST00000377270 SYNPRQ8TBG9 265 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 PCED1AQ9H1Q7 454 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 SERTM2A0A1B0GWG4 89 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 SLC22A31A6NKX4 558 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 IFITM5A6NNB3 132 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 DHRS7CA6NNS2 312 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 AQP7O14520 342 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 CNOT4O95628 575 aaKnown RBP13.86□□□□□ -0.19
FXN-201ENST00000377270 CTSBP07858 339 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 CTSEP14091 401 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 SLC16A1P53985 500 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 NHLH1Q02575 133 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 MGAT2Q10469 447 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 DEFB110Q30KQ9 67 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 KRTCAP3Q53RY4 240 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 DRAM2Q6UX65 266 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 PFN4Q8NHR9 129 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 FAM216AQ8WUB2 273 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 SMPDL3BQ92485 455 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 SHDQ96IW2 340 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 STACQ99469 402 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 G6PC3Q9BUM1 346 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 FAM60AQ9NP50 221 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 COMMD9Q9P000 198 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 CYP8B1Q9UNU6 501 aa13.86□□□□□ -0.19
FXN-201ENST00000377270 UNC119BA6NIH7 251 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 DOK2O60496 412 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 CD8AP01732 235 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 RAB40ALP0C0E4 278 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 GZMHP20718 246 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 RPS4Y1P22090 263 aaKnown RBP13.85□□□□□ -0.19
FXN-201ENST00000377270 CDK2P24941 298 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 EXOSC6Q5RKV6 272 aaKnown RBP13.85□□□□□ -0.19
FXN-201ENST00000377270 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.85□□□□□ -0.19
FXN-201ENST00000377270 OOSP2Q86WS3 158 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 OR9A4Q8NGU2 314 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 OR6N1Q8NGY5 312 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 C15orf40Q8WUR7 153 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 TMEM239Q8WW34 195 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 RAB40AQ8WXH6 277 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 ANKRD9Q96BM1 317 aaPredicted RBP13.85□□□□□ -0.19
FXN-201ENST00000377270 SYT3Q9BQG1 590 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 C20orf141Q9NUB4 165 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 ANKRD10Q9NXR5 420 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 HS3ST3B1Q9Y662 390 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 CXCL1P09341 107 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 ZGLP1P0C6A0 271 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 MAKP20794 623 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 CHRNB4P30926 498 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 HHEXQ03014 270 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 EIF5AL1Q6IS14 154 aaKnown RBP13.85□□□□□ -0.19
FXN-201ENST00000377270 DGAT2L6Q6ZPD8 337 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 OR5D18Q8NGL1 313 aa13.85□□□□□ -0.19
FXN-201ENST00000377270 OR4C16Q8NGL9 310 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms