RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 RNF144BQ7Z419 303 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 SGPP2Q8IWX5 399 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 LHFPL5Q8TAF8 219 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 RNF141Q8WVD5 230 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 CYYR1Q96J86 154 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 GNRHR2Q96P88 292 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 PRRG4Q9BZD6 226 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR10A2Q9H208 303 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 RARRES3Q9UL19 164 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 FBXO7Q9Y3I1 522 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 URGCP-MRPS24S4R325 110 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 TRBV5-5A0A0J9YX44 114 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 A0A1B0GX78 115 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 HMSDA8MTL9 139 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 MPTX1A8MV57 137 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 BGLAPP02818 100 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 PNLIPP16233 465 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 GNRHRP30968 328 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 TLE1Q04724 770 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 C6orf201Q7Z4U5 140 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 TMEM217Q8N7C4 229 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 CLRN3Q8NCR9 226 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 KCNG3Q8TAE7 436 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 PIGCQ92535 297 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 HDHD3Q9BSH5 251 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 KCNIP3Q9Y2W7 256 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR2M5A3KFT3 312 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR13C7P0DN81 318 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 RCC1P18754 421 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 HERV-K104P61576 105 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 BHLHE23Q8NDY6 225 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 ISOC2Q96AB3 205 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 SCGB3A2Q96PL1 93 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 ZNF2Q9BSG1 426 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 PIGLQ9Y2B2 252 aa12.81□□□□□ -0.36
TNFRSF1B-201ENST00000376259 BET1O15155 118 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 EIF4E2O60573 245 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 RBMXL2O75526 392 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 B3GALNT1O75752 331 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 ABHD16AO95870 558 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 CYCSP99999 105 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 PTCRAQ6ISU1 281 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 SLC36A1Q7Z2H8 476 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 SEMA6DQ8NFY4 1073 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 DYRK2Q92630 601 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 MRPS24Q96EL2 167 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 C12orf57Q99622 126 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 SLC25A32Q9H2D1 315 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 GLAP06280 429 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 ICAM2P13598 275 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 RPL7L1Q6DKI1 246 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR1N1Q8NGS0 311 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 TERB2Q8NHR7 220 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 DMRTA2Q96SC8 542 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 PIGMQ9H3S5 423 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 TAF9BQ9HBM6 251 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 ZNF275Q9NSD4 429 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 ALG1L2C9J202 215 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 CPT2P23786 658 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 RFC3P40938 356 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 EXD3Q8N9H8 876 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR13C8Q8NGS7 320 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR6K3Q8NGY3 331 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 AKR1E2Q96JD6 320 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 ULBP2Q9BZM5 246 aa12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 PRMT8Q9NR22 394 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF1B-201ENST00000376259 NPIPB9F8W1W9 429 aa12.79□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR2A4O95047 310 aa12.79□□□□□ -0.36
TNFRSF1B-201ENST00000376259 DCAF7P61962 342 aa12.79□□□□□ -0.36
TNFRSF1B-201ENST00000376259 IKZF1Q13422 519 aa12.79□□□□□ -0.36
TNFRSF1B-201ENST00000376259 MICBQ29980 383 aa12.79□□□□□ -0.36
TNFRSF1B-201ENST00000376259 ESX1Q8N693 406 aa12.79□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR2A7Q96R45 310 aa12.79□□□□□ -0.36
TNFRSF1B-201ENST00000376259 SLCO5A1Q9H2Y9 848 aa12.79□□□□□ -0.36
TNFRSF1B-201ENST00000376259 SCPEP1Q9HB40 452 aa12.79□□□□□ -0.36
TNFRSF1B-201ENST00000376259 PTRH2Q9Y3E5 179 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1B-201ENST00000376259 MMACHCQ9Y4U1 282 aa12.79□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR5H15A6NDH6 313 aa12.79□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR6C76A6NM76 312 aa12.79□□□□□ -0.36
TNFRSF1B-201ENST00000376259 C5orf67F2Z3F1 127 aa12.79□□□□□ -0.36
TNFRSF1B-201ENST00000376259 SGCEO43556 437 aa12.79□□□□□ -0.36
TNFRSF1B-201ENST00000376259 CBX5P45973 191 aa12.79□□□□□ -0.36
TNFRSF1B-201ENST00000376259 Q6ZRG5 221 aa12.79□□□□□ -0.36
TNFRSF1B-201ENST00000376259 CATSPERDQ86XM0 798 aa12.79□□□□□ -0.36
TNFRSF1B-201ENST00000376259 NKAIN3Q8N8D7 197 aa12.79□□□□□ -0.36
TNFRSF1B-201ENST00000376259 CMTM3Q96MX0 182 aa12.79□□□□□ -0.36
TNFRSF1B-201ENST00000376259 CDCA3Q99618 268 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OTX2P32243 289 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 KCNJ3P48549 501 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 PPIAP62937 165 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 VAMP2P63027 116 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 PUSL1Q8N0Z8 303 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR56B1Q8NGI3 324 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 FAM213BQ8TBF2 198 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 SLC5A7Q9GZV3 580 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 ZCCHC4Q9H5U6 513 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 MEX3AA1L020 520 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 G3V3Q6 166 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 SNAPINO95295 136 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 DUSP1P28562 367 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms