RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 TRIM36Q9NQ86 728 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 C14orf119Q9NWQ9 140 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 TAS2R1Q9NYW7 299 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 CTSZQ9UBR2 303 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 PRPF19Q9UMS4 504 aaKnown RBP11.83□□□□□ -0.52
NELFE-201ENST00000375425 DOCK11Q5JSL3 2073 aa11.83□□□□□ -0.52
NELFE-201ENST00000375425 MDFIC2A0A1B0GVS7 189 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 hCG_1807616A0A1W2PRN6 198 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 OOEPA6NGQ2 149 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 ANKRD30BLA7E2S9 258 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 CLDN34H7C241 214 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 ACOT8O14734 319 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 SPRY1O43609 319 aaPredicted RBP11.82□□□□□ -0.52
NELFE-201ENST00000375425 ENSAO43768 121 aaKnown RBP11.82□□□□□ -0.52
NELFE-201ENST00000375425 LHBP01229 141 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 GYPAP02724 150 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 POU1F1P28069 291 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 POU4F2Q12837 409 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 GK3PQ14409 553 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 TIGD6Q17RP2 521 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 CD276Q5ZPR3 534 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 PRSS45Q7RTY3 260 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 TMEM179BQ7Z7N9 219 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 GCSAMQ8N6F7 178 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 OR8S1Q8NH09 359 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 RNF133Q8WVZ7 376 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 TAF15Q92804 592 aaKnown RBP eCLIP11.82□□□□□ -0.52
NELFE-201ENST00000375425 REEP6Q96HR9 211 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 AMELYQ99218 206 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 PCGF1Q9BSM1 259 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 C1orf21Q9H246 121 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 OR51V1Q9H2C8 321 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 SP140LQ9H930 580 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 DNAJC27Q9NZQ0 273 aa11.82□□□□□ -0.52
NELFE-201ENST00000375425 PKD1L1Q8TDX9 2849 aa11.81□□□□□ -0.52
NELFE-201ENST00000375425 GNGT2O14610 69 aa11.81□□□□□ -0.52
NELFE-201ENST00000375425 GLCEO94923 617 aa11.81□□□□□ -0.52
NELFE-201ENST00000375425 APOC1P02654 83 aa11.81□□□□□ -0.52
NELFE-201ENST00000375425 LIPFP07098 398 aa11.81□□□□□ -0.52
NELFE-201ENST00000375425 SFTPBP07988 381 aa11.81□□□□□ -0.52
NELFE-201ENST00000375425 GRK5P34947 590 aa11.81□□□□□ -0.52
NELFE-201ENST00000375425 ZNF121P58317 390 aaPredicted RBP11.81□□□□□ -0.52
NELFE-201ENST00000375425 DEFB112Q30KQ8 113 aa11.81□□□□□ -0.52
NELFE-201ENST00000375425 GPR157Q5UAW9 335 aa11.81□□□□□ -0.52
NELFE-201ENST00000375425 FAM57BQ71RH2 274 aa11.81□□□□□ -0.52
NELFE-201ENST00000375425 RHOUQ7L0Q8 258 aa11.81□□□□□ -0.52
NELFE-201ENST00000375425 SHFQ7M4L6 423 aa11.81□□□□□ -0.52
NELFE-201ENST00000375425 C11orf53Q8IXP5 236 aa11.81□□□□□ -0.52
NELFE-201ENST00000375425 TIGD4Q8IY51 512 aa11.81□□□□□ -0.52
NELFE-201ENST00000375425 ADGRG5Q8IZF4 528 aa11.81□□□□□ -0.52
NELFE-201ENST00000375425 OR52H1Q8NGJ2 320 aa11.81□□□□□ -0.52
NELFE-201ENST00000375425 THTPAQ9BU02 230 aa11.81□□□□□ -0.52
NELFE-201ENST00000375425 MARCH7Q9H992 704 aa11.81□□□□□ -0.52
NELFE-201ENST00000375425 SMURF1Q9HCE7 757 aa11.81□□□□□ -0.52
NELFE-201ENST00000375425 BRD7Q9NPI1 651 aa11.81□□□□□ -0.52
NELFE-201ENST00000375425 PDP1Q9P0J1 537 aaPredicted RBP11.81□□□□□ -0.52
NELFE-201ENST00000375425 ZNF319Q9P2F9 582 aa11.81□□□□□ -0.52
NELFE-201ENST00000375425 ARRDC5A6NEK1 342 aa11.8□□□□□ -0.52
NELFE-201ENST00000375425 ZNF879B4DU55 563 aa11.8□□□□□ -0.52
NELFE-201ENST00000375425 H2BFMP0C1H6 154 aa11.8□□□□□ -0.52
NELFE-201ENST00000375425 OPRL1P41146 370 aa11.8□□□□□ -0.52
NELFE-201ENST00000375425 GSK3AP49840 483 aa11.8□□□□□ -0.52
NELFE-201ENST00000375425 BPIFB3P59826 476 aa11.8□□□□□ -0.52
NELFE-201ENST00000375425 GINS1Q14691 196 aa11.8□□□□□ -0.52
NELFE-201ENST00000375425 GFOD2Q3B7J2 385 aa11.8□□□□□ -0.52
NELFE-201ENST00000375425 C16orf87Q6PH81 154 aa11.8□□□□□ -0.52
NELFE-201ENST00000375425 SHISA2Q6UWI4 295 aa11.8□□□□□ -0.52
NELFE-201ENST00000375425 FAM90A1Q86YD7 464 aa11.8□□□□□ -0.52
NELFE-201ENST00000375425 CANT1Q8WVQ1 401 aa11.8□□□□□ -0.52
NELFE-201ENST00000375425 ZDHHC16Q969W1 377 aa11.8□□□□□ -0.52
NELFE-201ENST00000375425 PPP1R3EQ9H7J1 279 aa11.8□□□□□ -0.52
NELFE-201ENST00000375425 IGHV3OR15-7A0A075B7D8 119 aa11.79□□□□□ -0.52
NELFE-201ENST00000375425 hCG_38984A0A1B0GV85 526 aa11.79□□□□□ -0.52
NELFE-201ENST00000375425 PRR23D1E9PI22 279 aaPredicted RBP11.79□□□□□ -0.52
NELFE-201ENST00000375425 DVL1O14640 695 aa11.79□□□□□ -0.52
NELFE-201ENST00000375425 TMPRSS2O15393 492 aa11.79□□□□□ -0.52
NELFE-201ENST00000375425 HOXA3O43365 443 aaPredicted RBP11.79□□□□□ -0.52
NELFE-201ENST00000375425 FCN3O75636 299 aa11.79□□□□□ -0.52
NELFE-201ENST00000375425 TOX4O94842 621 aa11.79□□□□□ -0.52
NELFE-201ENST00000375425 PRR23D2P0DMB1 279 aaPredicted RBP11.79□□□□□ -0.52
NELFE-201ENST00000375425 MMP9P14780 707 aa11.79□□□□□ -0.52
NELFE-201ENST00000375425 PAICSP22234 425 aaKnown RBP11.79□□□□□ -0.52
NELFE-201ENST00000375425 CFL1P23528 166 aaKnown RBP11.79□□□□□ -0.52
NELFE-201ENST00000375425 CFHR2P36980 270 aa11.79□□□□□ -0.52
NELFE-201ENST00000375425 KLHL12Q53G59 568 aa11.79□□□□□ -0.52
NELFE-201ENST00000375425 TEX36Q5VZQ5 186 aa11.79□□□□□ -0.52
NELFE-201ENST00000375425 PLBD1Q6P4A8 553 aa11.79□□□□□ -0.52
NELFE-201ENST00000375425 BTN2A1Q7KYR7 527 aa11.79□□□□□ -0.52
NELFE-201ENST00000375425 WDR86Q86TI4 376 aa11.79□□□□□ -0.52
NELFE-201ENST00000375425 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.79□□□□□ -0.52
NELFE-201ENST00000375425 PNLDC1Q8NA58 520 aaKnown RBP11.79□□□□□ -0.52
NELFE-201ENST00000375425 OR1M1Q8NGA1 313 aa11.79□□□□□ -0.52
NELFE-201ENST00000375425 THEM6Q8WUY1 208 aa11.79□□□□□ -0.52
NELFE-201ENST00000375425 PGAM5Q96HS1 289 aa11.79□□□□□ -0.52
NELFE-201ENST00000375425 WDFY2Q96P53 400 aa11.79□□□□□ -0.52
NELFE-201ENST00000375425 OR10A2Q9H208 303 aa11.79□□□□□ -0.52
NELFE-201ENST00000375425 PRDM13Q9H4Q3 707 aa11.79□□□□□ -0.52
NELFE-201ENST00000375425 UNKLQ9H9P5 680 aaKnown RBP11.79□□□□□ -0.52
NELFE-201ENST00000375425 RNPEPL1Q9HAU8 725 aa11.79□□□□□ -0.52
NELFE-201ENST00000375425 KAAG1Q9UBP8 84 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms