RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 SDF2Q99470 211 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 ZNF346Q9UL40 294 aaKnown RBP12.95□□□□□ -0.34
TRAF1-201ENST00000373887 LAMP3Q9UQV4 416 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 HIST1H1CP16403 213 aaKnown RBP12.94□□□□□ -0.34
TRAF1-201ENST00000373887 HRH1P35367 487 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 ERVFC1-1P60608 527 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 TEAD3Q99594 435 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 SARGQ9BW04 601 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 LIN7CQ9NUP9 197 aaKnown RBP12.94□□□□□ -0.34
TRAF1-201ENST00000373887 RCL1Q9Y2P8 373 aaKnown RBP12.94□□□□□ -0.34
TRAF1-201ENST00000373887 STRCP1A6NGW2 1772 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 GATCO43716 136 aaKnown RBP12.94□□□□□ -0.34
TRAF1-201ENST00000373887 MT-ATP6P00846 226 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 RRASP10301 218 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 BAK1Q16611 211 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 ARHGEF39Q8N4T4 335 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 OR2AK2Q8NG84 335 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 TMEM18Q96B42 140 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 MOB3AQ96BX8 217 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 NUDT9Q9BW91 350 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 NCBP2LA6PVI3 153 aaKnown RBP12.94□□□□□ -0.34
TRAF1-201ENST00000373887 HES3Q5TGS1 186 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 FA2HQ7L5A8 372 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 ZDHHC16Q969W1 377 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 SARAFQ96BY9 339 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 H0YIG0 161 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 PHOX2AO14813 284 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 SPINK4O60575 86 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 OR2F2O95006 317 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 OR2F1Q13607 317 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 CYHR1Q6ZMK1 362 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 OR1C1Q15619 314 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 ACOT7LQ6ZUV0 252 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 OR2T6Q8NHC8 308 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 NDRG3Q9UGV2 375 aa12.94□□□□□ -0.34
TRAF1-201ENST00000373887 A0A1W2PR80 420 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 XRCC2O43543 280 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 NRASP01111 189 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 CTXN2P0C2S0 81 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 TGFBR1P36897 503 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 TUSC1Q2TAM9 212 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 WDR88Q6ZMY6 472 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 ZNF707Q96C28 371 aaPredicted RBP12.93□□□□□ -0.34
TRAF1-201ENST00000373887 C12orf57Q99622 126 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 GPR84Q9NQS5 396 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 MED29Q9NX70 200 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 C19orf53Q9UNZ5 99 aaPredicted RBP12.93□□□□□ -0.34
TRAF1-201ENST00000373887 SPP1P10451 314 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 PCBP4P57723 403 aaKnown RBP12.93□□□□□ -0.34
TRAF1-201ENST00000373887 RPS23P62266 143 aaKnown RBP12.93□□□□□ -0.34
TRAF1-201ENST00000373887 RNASEKQ6P5S7 137 aaKnown RBP12.93□□□□□ -0.34
TRAF1-201ENST00000373887 MORN4Q8NDC4 146 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 FBXO4Q9UKT5 387 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 IGHV1OR15-9A0A0B4J2B8 117 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 FIGNL2A6NMB9 653 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 M0QZ24 198 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 MBP02144 154 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 RPS27P42677 84 aaKnown RBP12.93□□□□□ -0.34
TRAF1-201ENST00000373887 TMEM215Q68D42 235 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 KLHDC8BQ8IXV7 354 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 OR52B4Q8NGK2 314 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 SPNS1Q9H2V7 528 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 NDRG4Q9ULP0 352 aaKnown RBP12.93□□□□□ -0.34
TRAF1-201ENST00000373887 TIMM10BQ9Y5J6 103 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 SLC22A20A6NK97 555 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 GOSR1O95249 250 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 RAB5AP20339 215 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 SYT14P1Q58G82 188 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 CADM3Q8N126 398 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 NAGKQ9UJ70 344 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 GDF2Q9UK05 429 aaPredicted RBP12.93□□□□□ -0.34
TRAF1-201ENST00000373887 POMT2Q9UKY4 750 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 POLDIP2Q9Y2S7 368 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 EIF4E2O60573 245 aaKnown RBP12.93□□□□□ -0.34
TRAF1-201ENST00000373887 FCMRO60667 390 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 ETHE1O95571 254 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 TPPP2P59282 170 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 SAXO2Q658L1 398 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 OR11G2Q8NGC1 345 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 MARCH1Q8TCQ1 289 aa12.93□□□□□ -0.34
TRAF1-201ENST00000373887 C1QBP02746 253 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 COX5AP20674 150 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 BTG1P62324 171 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 SPATA46Q5T0L3 261 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 OR2A1Q8NGT9 310 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 VAMP8Q9BV40 100 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 ESRP2Q9H6T0 727 aaKnown RBP12.92□□□□□ -0.34
TRAF1-201ENST00000373887 SCPEP1Q9HB40 452 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 PMS2P1A4D2B8 440 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 H3BP45 60 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 RBP4P02753 201 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 SBK2P0C263 348 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 PSMB6P28072 239 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 PIGPP57054 158 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 INSM1Q01101 510 aaPredicted RBP12.92□□□□□ -0.34
TRAF1-201ENST00000373887 DHRS11Q6UWP2 260 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 DYNC2LI1Q8TCX1 351 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 PLPPR2Q96GM1 343 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 DLL4Q9NR61 685 aa12.92□□□□□ -0.34
TRAF1-201ENST00000373887 CLEC1BQ9P126 229 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms