RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.48□□□□□ -0.57
GPC4-201ENST00000370828 LRP11Q86VZ4 500 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 ARRDC3Q96B67 414 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 FBXL17Q9UF56 701 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 DDX60LQ5H9U9 1706 aaKnown RBP11.48□□□□□ -0.57
GPC4-201ENST00000370828 OR5H15A6NDH6 313 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 OR5H1A6NKK0 313 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 C17orf112F2Z3M2 114 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 OR7C2O60412 319 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 OR10J1P30954 320 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 NOVA1P51513 510 aaKnown RBP11.48□□□□□ -0.57
GPC4-201ENST00000370828 RPL27P61353 136 aaKnown RBP11.48□□□□□ -0.57
GPC4-201ENST00000370828 GABREP78334 506 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 RPL18Q07020 188 aaKnown RBP11.48□□□□□ -0.57
GPC4-201ENST00000370828 PWWP2BQ6NUJ5 590 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 SLC35G3Q8N808 338 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 MS4A3Q96HJ5 214 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 EMC6Q9BV81 110 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 DDA1Q9BW61 102 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 SIGLEC7Q9Y286 467 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 TJP1Q07157 1748 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 A0A1W2PNV4 684 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 H3BP45 60 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 VWA2Q5GFL6 755 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 FAM219AQ8IW50 185 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 ASCL3Q9NQ33 180 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 CCL27Q9Y4X3 112 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 CDC42EP2O14613 210 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 IGHA1P01876 353 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 EGR3Q06889 387 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 SPNS3Q6ZMD2 512 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 RTN4IP1Q8WWV3 396 aaPredicted RBP11.47□□□□□ -0.57
GPC4-201ENST00000370828 STACQ99469 402 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 EPHX3Q9H6B9 360 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 RCL1Q9Y2P8 373 aaKnown RBP11.47□□□□□ -0.57
GPC4-201ENST00000370828 FER1L6Q2WGJ9 1857 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 M0R1X1 148 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 OR5H8P0DN80 308 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 HNRNPA2B1P22626 353 aaKnown RBP11.47□□□□□ -0.57
GPC4-201ENST00000370828 GZMMP51124 257 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 DCAF12L2Q5VW00 463 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 FBXO46Q6PJ61 603 aaPredicted RBP11.47□□□□□ -0.57
GPC4-201ENST00000370828 CD300LDQ6UXZ3 194 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 THSD4Q6ZMP0 1018 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 LDLRAD3Q86YD5 345 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 ZDHHC22Q8N966 263 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 MR1Q95460 341 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 MRPS24Q96EL2 167 aaKnown RBP11.47□□□□□ -0.57
GPC4-201ENST00000370828 SAT2Q96F10 170 aaPredicted RBP11.47□□□□□ -0.57
GPC4-201ENST00000370828 LPAR4Q99677 370 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 GPR87Q9BY21 358 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 CHST6Q9GZX3 395 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 PRR13Q9NZ81 148 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 LRIT1Q9P2V4 623 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 INSL6Q9Y581 213 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 TCRBV21S2A2A0A5A6 115 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 TRAPPC2LH3BP13 241 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 KCNAB3O43448 404 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 PRKNO60260 465 aaPredicted RBP11.47□□□□□ -0.57
GPC4-201ENST00000370828 ICAM2P13598 275 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 SKP2Q13309 424 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 C1orf185Q5T7R7 199 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 SLC38A9Q8NBW4 561 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 OR4D11Q8NGI4 311 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 FBLIM1Q8WUP2 373 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 ZNF426Q9BUY5 554 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 FOXJ2Q9P0K8 574 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 LPAR3Q9UBY5 353 aa11.47□□□□□ -0.57
GPC4-201ENST00000370828 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.47□□□□□ -0.57
GPC4-201ENST00000370828 RAB29O14966 203 aa11.46□□□□□ -0.57
GPC4-201ENST00000370828 CTDSPLO15194 276 aa11.46□□□□□ -0.57
GPC4-201ENST00000370828 SMPD2O60906 423 aa11.46□□□□□ -0.57
GPC4-201ENST00000370828 TUSC2O75896 110 aa11.46□□□□□ -0.57
GPC4-201ENST00000370828 KLK3P07288 261 aaPredicted RBP11.46□□□□□ -0.57
GPC4-201ENST00000370828 PLAC9Q5JTB6 97 aa11.46□□□□□ -0.57
GPC4-201ENST00000370828 NUDT10Q8NFP7 164 aa11.46□□□□□ -0.57
GPC4-201ENST00000370828 IL22RA2Q969J5 263 aa11.46□□□□□ -0.57
GPC4-201ENST00000370828 CASD1Q96PB1 797 aa11.46□□□□□ -0.57
GPC4-201ENST00000370828 ULBP2Q9BZM5 246 aa11.46□□□□□ -0.57
GPC4-201ENST00000370828 ABI3Q9P2A4 366 aa11.46□□□□□ -0.57
GPC4-201ENST00000370828 TMEM272A0A1B0GTI8 110 aa11.46□□□□□ -0.57
GPC4-201ENST00000370828 GPR37O15354 613 aa11.46□□□□□ -0.57
GPC4-201ENST00000370828 FZD6O60353 706 aa11.46□□□□□ -0.57
GPC4-201ENST00000370828 SLC35E2P0CK97 266 aa11.46□□□□□ -0.57
GPC4-201ENST00000370828 SPANXN5Q5MJ07 72 aa11.46□□□□□ -0.57
GPC4-201ENST00000370828 PRSS54Q6PEW0 395 aa11.46□□□□□ -0.57
GPC4-201ENST00000370828 NRSN2Q9GZP1 204 aa11.46□□□□□ -0.57
GPC4-201ENST00000370828 SIRT3Q9NTG7 399 aaPredicted RBP11.46□□□□□ -0.57
GPC4-201ENST00000370828 MYOTQ9UBF9 498 aa11.46□□□□□ -0.57
GPC4-201ENST00000370828 HCRTR1O43613 425 aa11.46□□□□□ -0.58
GPC4-201ENST00000370828 CTSAP10619 480 aa11.46□□□□□ -0.58
GPC4-201ENST00000370828 ABOP16442 354 aa11.46□□□□□ -0.58
GPC4-201ENST00000370828 CHRNB4P30926 498 aa11.46□□□□□ -0.58
GPC4-201ENST00000370828 AGFG1P52594 562 aaKnown RBP11.46□□□□□ -0.58
GPC4-201ENST00000370828 NKAIN1Q4KMZ8 207 aa11.46□□□□□ -0.58
GPC4-201ENST00000370828 CCL26Q9Y258 94 aa11.46□□□□□ -0.58
GPC4-201ENST00000370828 A0A0B4J293 547 aa11.46□□□□□ -0.58
GPC4-201ENST00000370828 FGF17O60258 216 aa11.46□□□□□ -0.58
GPC4-201ENST00000370828 ZNF133P52736 654 aaPredicted RBP11.46□□□□□ -0.58
GPC4-201ENST00000370828 PLP1P60201 277 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms