RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 FBLL1A6NHQ2 334 aaKnown RBP11.32□□□□□ -0.6
HCFC1-202ENST00000369984 ZNF346Q9UL40 294 aaKnown RBP11.32□□□□□ -0.6
HCFC1-202ENST00000369984 FLVCR2Q9UPI3 526 aa11.32□□□□□ -0.6
HCFC1-202ENST00000369984 NUMBLQ9Y6R0 609 aa11.32□□□□□ -0.6
HCFC1-202ENST00000369984 FFAR4Q5NUL3 377 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 AGBL4Q5VU57 503 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 RNASEKQ6P5S7 137 aaKnown RBP11.31□□□□□ -0.6
HCFC1-202ENST00000369984 TMEM99Q8N816 258 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 LAMP3Q9UQV4 416 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 DOCK11Q5JSL3 2073 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 HSBP1O75506 76 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 KCNAB1Q14722 419 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 CYHR1Q6ZMK1 362 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 DYNC2LI1Q8TCX1 351 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 TIMM10BQ9Y5J6 103 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 DDX60LQ5H9U9 1706 aaKnown RBP11.31□□□□□ -0.6
HCFC1-202ENST00000369984 MBLAC1A4D2B0 266 aaPredicted RBP11.31□□□□□ -0.6
HCFC1-202ENST00000369984 CLEC18AA5D8T8 446 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 M0R135 149 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 LYG2Q86SG7 212 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 YRDCQ86U90 279 aaKnown RBP11.31□□□□□ -0.6
HCFC1-202ENST00000369984 FUNDC1Q8IVP5 155 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 CMTM4Q8IZR5 234 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 CLEC18CQ8NCF0 446 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 ZNF680Q8NEM1 530 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 ZNF799Q96GE5 643 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 CHST6Q9GZX3 395 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 ATP23Q9Y6H3 246 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 A0A1B0GUH1 482 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 FAM166BA8MTA8 275 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 TPOP07202 933 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 GPX2P18283 190 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 PI3P19957 117 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 ELAVL1Q15717 326 aaKnown RBP11.31□□□□□ -0.6
HCFC1-202ENST00000369984 METRNLQ641Q3 311 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 SIRT6Q8N6T7 355 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 GSX1Q9H4S2 264 aaPredicted RBP11.31□□□□□ -0.6
HCFC1-202ENST00000369984 SNRPGP15A8MWD9 76 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 CD1EP15812 388 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 RPS23P62266 143 aaKnown RBP11.31□□□□□ -0.6
HCFC1-202ENST00000369984 ZNF816Q0VGE8 651 aaPredicted RBP11.31□□□□□ -0.6
HCFC1-202ENST00000369984 DLEU7Q6UYE1 221 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 UBE3DQ7Z6J8 389 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 CMBLQ96DG6 245 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 ELOVL1Q9BW60 279 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 FAM221AA4D161 298 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 EIF4E2O60573 245 aaKnown RBP11.31□□□□□ -0.6
HCFC1-202ENST00000369984 OR5AL1P0C617 328 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 SFTA3P0C7M3 94 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 GALMQ96C23 342 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 HRO43593 1189 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 HIST1H3AP68431 136 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 FABP5Q01469 135 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 AANATQ16613 207 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 FAM71E1Q6IPT2 247 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 GABARAPL3Q9BY60 117 aa11.31□□□□□ -0.6
HCFC1-202ENST00000369984 SIAH2O43255 324 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 ISL1P61371 349 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 OR52B4Q8NGK2 314 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 ZPBPQ9BS86 351 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 ISG20L2Q9H9L3 353 aaKnown RBP11.3□□□□□ -0.6
HCFC1-202ENST00000369984 DOCK1Q14185 1865 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 KIF26BQ2KJY2 2108 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 CCDC187A0A096LP49 1063 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 A0A096LPE4 126 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 A0A1W2PPZ6 126 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 M0R1B8 84 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 SHHQ15465 462 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 LINC00299Q6ZSB3 139 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 EIF4E3Q8N5X7 224 aaKnown RBP11.3□□□□□ -0.6
HCFC1-202ENST00000369984 MARCH1Q8TCQ1 289 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 SYT11Q9BT88 431 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 MRPL13Q9BYD1 178 aaKnown RBP11.3□□□□□ -0.6
HCFC1-202ENST00000369984 RREB1Q92766 1687 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 DNAJC25-GNG10A0A024R161 153 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 B3GALT4O96024 378 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 CD37P11049 281 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 ANKRD16Q6P6B7 361 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 LSRQ86X29 649 aaPredicted RBP11.3□□□□□ -0.6
HCFC1-202ENST00000369984 CDCA4Q9BXL8 241 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 MAGT1Q9H0U3 335 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 SPNS1Q9H2V7 528 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 AAMDCQ9H7C9 122 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 IGHV3-20A0A0C4DH32 117 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 IFITM5A6NNB3 132 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 K7ESM1 405 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 GALR1P47211 349 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 HSF5Q4G112 596 aaPredicted RBP11.3□□□□□ -0.6
HCFC1-202ENST00000369984 ZDHHC23Q8IYP9 409 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 CLRN3Q8NCR9 226 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 SDF2Q99470 211 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 CMC2Q9NRP2 79 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 NRG2O14511 850 aaPredicted RBP11.3□□□□□ -0.6
HCFC1-202ENST00000369984 CBR3O75828 277 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 LY86O95711 162 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 ARRB2P32121 409 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 DUSP8Q13202 625 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 ZNF385BQ569K4 471 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 ARAP2Q8WZ64 1704 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 A0A087X0M5 115 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms