RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 PRAMEF27A3QJZ7 478 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 C9J4A7 227 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 GABARAPH6UMI1 98 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 J3KTA2 159 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 PHOX2AO14813 284 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 REM1O75628 298 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 RGS9O75916 674 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-204ENST00000369530 DIRAS3O95661 229 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 ANXA2P07355 339 aaKnown RBP6.08□□□□□ -1.44
CSDE1-204ENST00000369530 TCN2P20062 427 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 ZNF10P21506 573 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-204ENST00000369530 HIST1H1TP22492 207 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-204ENST00000369530 DGCR2P98153 550 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 FBXL19-AS1Q494R0 122 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 SLC25A53Q5H9E4 307 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 REEP3Q6NUK4 255 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 CLEC9AQ6UXN8 241 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 CD163Q86VB7 1156 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 ZNF595Q8IYB9 648 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 GALNT16Q8N428 558 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 HORMAD2Q8N7B1 307 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 MORN4Q8NDC4 146 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 SLC7A13Q8TCU3 470 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 NEK7Q8TDX7 302 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 FBXO17Q96EF6 278 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 C1GALT1C1Q96EU7 318 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 PIGQQ9BRB3 760 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 TRIM2Q9C040 744 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 HDGFL3Q9Y3E1 203 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 DYNC2H1Q8NCM8 4307 aaKnown RBP6.08□□□□□ -1.44
CSDE1-204ENST00000369530 KIR2DL5BA0A0G2JN68 375 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 KIR2DL5BA0A0G2JPC4 375 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 TMEM272A0A1B0GTI8 110 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 PRAMEF25A6NGN4 478 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 M0R143 59 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 LDLRAD4O15165 306 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 B3GALT2O43825 422 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 FBXO24O75426 580 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 MT-ND4P03905 459 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 CT45A8P0DMV1 189 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 CT45A9P0DMV2 189 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 LMO1P25800 156 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 G0S2P27469 103 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 BTG2P78543 158 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 ADORA2A-AS1P86434 159 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 CT45A2Q5DJT8 189 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 LY6G6FQ5SQ64 297 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 NCMAPQ5T1S8 102 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 OR10K2Q6IF99 312 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 ZCCHC12Q6PEW1 402 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 PRSS58Q8IYP2 241 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 GCNT2Q8N0V5 402 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 KIR2DL5AQ8N109 375 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 LRRC25Q8N386 305 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-204ENST00000369530 ZNF283Q8N7M2 679 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 TMEM104Q8NE00 496 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 OR1N1Q8NGS0 311 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 CNRIP1Q96F85 164 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-204ENST00000369530 STACQ99469 402 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 ZNF2Q9BSG1 426 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-204ENST00000369530 SCRT1Q9BWW7 348 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 OR51I1Q9H343 314 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 TRAV1-2A0A0B4J238 106 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 RRP8O43159 456 aaKnown RBP6.08□□□□□ -1.44
CSDE1-204ENST00000369530 AGR2O95994 175 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 KLRB1Q12918 225 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 MAPK14Q16539 360 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 SYPL1Q16563 259 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 SYT14P1Q58G82 188 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 SLC48A1Q6P1K1 146 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 ACOT7LQ6ZUV0 252 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 OR10AD1Q8NGE0 317 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 THAP3Q8WTV1 239 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-204ENST00000369530 RNF141Q8WVD5 230 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 GEMIN6Q8WXD5 167 aaKnown RBP6.08□□□□□ -1.44
CSDE1-204ENST00000369530 ZNF582Q96NG8 517 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-204ENST00000369530 GINS4Q9BRT9 223 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 SERTAD3Q9UJW9 196 aa6.08□□□□□ -1.44
CSDE1-204ENST00000369530 LYSTQ99698 3801 aa6.07□□□□□ -1.44
CSDE1-204ENST00000369530 OR5H15A6NDH6 313 aa6.07□□□□□ -1.44
CSDE1-204ENST00000369530 OR5H1A6NKK0 313 aa6.07□□□□□ -1.44
CSDE1-204ENST00000369530 SULT2B1O00204 365 aa6.07□□□□□ -1.44
CSDE1-204ENST00000369530 HSPA12AO43301 675 aa6.07□□□□□ -1.44
CSDE1-204ENST00000369530 FGF17O60258 216 aa6.07□□□□□ -1.44
CSDE1-204ENST00000369530 LDB3O75112 727 aa6.07□□□□□ -1.44
CSDE1-204ENST00000369530 ALOX12BO75342 701 aa6.07□□□□□ -1.44
CSDE1-204ENST00000369530 SOX14O95416 240 aa6.07□□□□□ -1.44
CSDE1-204ENST00000369530 HMGN2P05204 90 aaKnown RBP6.07□□□□□ -1.44
CSDE1-204ENST00000369530 HPNP05981 417 aa6.07□□□□□ -1.44
CSDE1-204ENST00000369530 SNRPCP09234 159 aaKnown RBP6.07□□□□□ -1.44
CSDE1-204ENST00000369530 VSIG10L2P0DP72 767 aa6.07□□□□□ -1.44
CSDE1-204ENST00000369530 EGR3Q06889 387 aa6.07□□□□□ -1.44
CSDE1-204ENST00000369530 COA6Q5JTJ3 125 aaKnown RBP6.07□□□□□ -1.44
CSDE1-204ENST00000369530 SFXN4Q6P4A7 337 aa6.07□□□□□ -1.44
CSDE1-204ENST00000369530 SMARCD3Q6STE5 483 aa6.07□□□□□ -1.44
CSDE1-204ENST00000369530 ZNF664Q8N3J9 261 aa6.07□□□□□ -1.44
CSDE1-204ENST00000369530 SLC35A4Q96G79 324 aa6.07□□□□□ -1.44
CSDE1-204ENST00000369530 FNDC11Q9BVV2 318 aa6.07□□□□□ -1.44
CSDE1-204ENST00000369530 RERGLQ9H628 205 aa6.07□□□□□ -1.44
CSDE1-204ENST00000369530 APC2O95996 2303 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms