RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 CDH15P55291 814 aa12.34□□□□□ -0.43
SF3B5-201ENST00000367569 TMEM33P57088 247 aa12.34□□□□□ -0.43
SF3B5-201ENST00000367569 LMO4P61968 165 aa12.34□□□□□ -0.43
SF3B5-201ENST00000367569 MAB21L1Q13394 359 aa12.34□□□□□ -0.43
SF3B5-201ENST00000367569 ZMYND11Q15326 602 aa12.34□□□□□ -0.43
SF3B5-201ENST00000367569 ZBTB49Q6ZSB9 765 aa12.34□□□□□ -0.43
SF3B5-201ENST00000367569 OR8J1Q8NGP2 316 aa12.34□□□□□ -0.43
SF3B5-201ENST00000367569 RAB1CQ92928 201 aa12.34□□□□□ -0.43
SF3B5-201ENST00000367569 PAPOLGQ9BWT3 736 aaKnown RBP12.34□□□□□ -0.43
SF3B5-201ENST00000367569 FAM206AQ9NX38 181 aa12.34□□□□□ -0.43
SF3B5-201ENST00000367569 NPTNQ9Y639 398 aa12.34□□□□□ -0.43
SF3B5-201ENST00000367569 TMEM269A0A1B0GVZ9 245 aa12.33□□□□□ -0.44
SF3B5-201ENST00000367569 PNPP00491 289 aa12.33□□□□□ -0.44
SF3B5-201ENST00000367569 IGHV2-70P01814 119 aa12.33□□□□□ -0.44
SF3B5-201ENST00000367569 IGHV2-5P01817 119 aa12.33□□□□□ -0.44
SF3B5-201ENST00000367569 ANPEPP15144 967 aa12.33□□□□□ -0.44
SF3B5-201ENST00000367569 ACKR3P25106 362 aa12.33□□□□□ -0.44
SF3B5-201ENST00000367569 CD80P33681 288 aa12.33□□□□□ -0.44
SF3B5-201ENST00000367569 SEC61A1P61619 476 aaKnown RBP12.33□□□□□ -0.44
SF3B5-201ENST00000367569 ODF4Q2M2E3 257 aa12.33□□□□□ -0.44
SF3B5-201ENST00000367569 KCTD18Q6PI47 426 aaPredicted RBP12.33□□□□□ -0.44
SF3B5-201ENST00000367569 ZNF826PQ6ZT77 177 aa12.33□□□□□ -0.44
SF3B5-201ENST00000367569 WDR86Q86TI4 376 aa12.33□□□□□ -0.44
SF3B5-201ENST00000367569 C10orf67Q8IYJ2 551 aa12.33□□□□□ -0.44
SF3B5-201ENST00000367569 LINC01356Q8N9X3 169 aa12.33□□□□□ -0.44
SF3B5-201ENST00000367569 OR52H1Q8NGJ2 320 aa12.33□□□□□ -0.44
SF3B5-201ENST00000367569 HPS1Q92902 700 aa12.33□□□□□ -0.44
SF3B5-201ENST00000367569 SPSB4Q96A44 273 aa12.33□□□□□ -0.44
SF3B5-201ENST00000367569 FAM71F1Q96KD3 344 aaPredicted RBP12.33□□□□□ -0.44
SF3B5-201ENST00000367569 HRASLS5Q96KN8 279 aa12.33□□□□□ -0.44
SF3B5-201ENST00000367569 MROQ9BYG7 248 aa12.33□□□□□ -0.44
SF3B5-201ENST00000367569 NIPAL2Q9H841 368 aa12.33□□□□□ -0.44
SF3B5-201ENST00000367569 CLN6Q9NWW5 311 aa12.33□□□□□ -0.44
SF3B5-201ENST00000367569 WARS2Q9UGM6 360 aaKnown RBP12.33□□□□□ -0.44
SF3B5-201ENST00000367569 MRM2Q9UI43 246 aaKnown RBP12.33□□□□□ -0.44
SF3B5-201ENST00000367569 RHBDD3Q9Y3P4 386 aa12.33□□□□□ -0.44
SF3B5-201ENST00000367569 A0A1W2PQL4 384 aaPredicted RBP12.32□□□□□ -0.44
SF3B5-201ENST00000367569 A6NLC8 198 aa12.32□□□□□ -0.44
SF3B5-201ENST00000367569 ANKRD30BLA7E2S9 258 aa12.32□□□□□ -0.44
SF3B5-201ENST00000367569 TMEM178BH3BS89 294 aa12.32□□□□□ -0.44
SF3B5-201ENST00000367569 CLIC3O95833 236 aa12.32□□□□□ -0.44
SF3B5-201ENST00000367569 GRPP07492 148 aa12.32□□□□□ -0.44
SF3B5-201ENST00000367569 ATP6V1E1P36543 226 aa12.32□□□□□ -0.44
SF3B5-201ENST00000367569 RIDAP52758 137 aaKnown RBP12.32□□□□□ -0.44
SF3B5-201ENST00000367569 BTG1P62324 171 aa12.32□□□□□ -0.44
SF3B5-201ENST00000367569 CSNK2BP67870 215 aa12.32□□□□□ -0.44
SF3B5-201ENST00000367569 TP53I3Q53FA7 332 aa12.32□□□□□ -0.44
SF3B5-201ENST00000367569 ENTHD1Q8IYW4 607 aa12.32□□□□□ -0.44
SF3B5-201ENST00000367569 ZNF679Q8IYX0 411 aa12.32□□□□□ -0.44
SF3B5-201ENST00000367569 OR8S1Q8NH09 359 aa12.32□□□□□ -0.44
SF3B5-201ENST00000367569 OR51E1Q8TCB6 317 aa12.32□□□□□ -0.44
SF3B5-201ENST00000367569 RNFT2Q96EX2 444 aa12.32□□□□□ -0.44
SF3B5-201ENST00000367569 C1orf159Q96HA4 380 aa12.32□□□□□ -0.44
SF3B5-201ENST00000367569 PBOV1Q9GZY1 135 aa12.32□□□□□ -0.44
SF3B5-201ENST00000367569 E9PQ18 207 aa12.31□□□□□ -0.44
SF3B5-201ENST00000367569 LOC110117498-PIK3R3F6TDL0 507 aa12.31□□□□□ -0.44
SF3B5-201ENST00000367569 APOC1P02654 83 aa12.31□□□□□ -0.44
SF3B5-201ENST00000367569 PSMB10P40306 273 aa12.31□□□□□ -0.44
SF3B5-201ENST00000367569 CD200P41217 278 aa12.31□□□□□ -0.44
SF3B5-201ENST00000367569 GMFBP60983 142 aa12.31□□□□□ -0.44
SF3B5-201ENST00000367569 LCN2P80188 198 aa12.31□□□□□ -0.44
SF3B5-201ENST00000367569 ZNF85Q03923 595 aa12.31□□□□□ -0.44
SF3B5-201ENST00000367569 GABPB1Q06547 395 aaPredicted RBP12.31□□□□□ -0.44
SF3B5-201ENST00000367569 SLC3A1Q07837 685 aa12.31□□□□□ -0.44
SF3B5-201ENST00000367569 ZNF829Q3KNS6 432 aaPredicted RBP12.31□□□□□ -0.44
SF3B5-201ENST00000367569 BCL2L15Q5TBC7 163 aa12.31□□□□□ -0.44
SF3B5-201ENST00000367569 PEG10Q86TG7 708 aaKnown RBP12.31□□□□□ -0.44
SF3B5-201ENST00000367569 YIPF7Q8N8F6 280 aa12.31□□□□□ -0.44
SF3B5-201ENST00000367569 DEFB108BQ8NET1 73 aa12.31□□□□□ -0.44
SF3B5-201ENST00000367569 ASB17Q8WXJ9 295 aa12.31□□□□□ -0.44
SF3B5-201ENST00000367569 FGF23Q9GZV9 251 aaPredicted RBP12.31□□□□□ -0.44
SF3B5-201ENST00000367569 OPA3Q9H6K4 179 aa12.31□□□□□ -0.44
SF3B5-201ENST00000367569 METTL17Q9H7H0 456 aaPredicted RBP12.31□□□□□ -0.44
SF3B5-201ENST00000367569 SP140LQ9H930 580 aa12.31□□□□□ -0.44
SF3B5-201ENST00000367569 AMBNQ9NP70 447 aa12.31□□□□□ -0.44
SF3B5-201ENST00000367569 GPR84Q9NQS5 396 aa12.31□□□□□ -0.44
SF3B5-201ENST00000367569 C1orf123Q9NWV4 160 aa12.31□□□□□ -0.44
SF3B5-201ENST00000367569 MRPL15Q9P015 296 aaKnown RBP12.31□□□□□ -0.44
SF3B5-201ENST00000367569 SLC22A13Q9Y226 551 aa12.31□□□□□ -0.44
SF3B5-201ENST00000367569 TMEM14AQ9Y6G1 99 aa12.31□□□□□ -0.44
SF3B5-201ENST00000367569 A0A1B0GWJ7 208 aa12.3□□□□□ -0.44
SF3B5-201ENST00000367569 hCG_1807616A0A1W2PRN6 198 aa12.3□□□□□ -0.44
SF3B5-201ENST00000367569 A6NIN4 97 aa12.3□□□□□ -0.44
SF3B5-201ENST00000367569 ZNF850A8MQ14 1090 aa12.3□□□□□ -0.44
SF3B5-201ENST00000367569 P2RY10O00398 339 aa12.3□□□□□ -0.44
SF3B5-201ENST00000367569 DLGAP1O14490 977 aa12.3□□□□□ -0.44
SF3B5-201ENST00000367569 SRSF10O75494 262 aaKnown RBP12.3□□□□□ -0.44
SF3B5-201ENST00000367569 TTRP02766 147 aa12.3□□□□□ -0.44
SF3B5-201ENST00000367569 MSMBP08118 114 aa12.3□□□□□ -0.44
SF3B5-201ENST00000367569 FAHP16930 419 aa12.3□□□□□ -0.44
SF3B5-201ENST00000367569 EGR1P18146 543 aa12.3□□□□□ -0.44
SF3B5-201ENST00000367569 GNALP38405 381 aa12.3□□□□□ -0.44
SF3B5-201ENST00000367569 ROM1Q03395 351 aa12.3□□□□□ -0.44
SF3B5-201ENST00000367569 ZNF91Q05481 1191 aa12.3□□□□□ -0.44
SF3B5-201ENST00000367569 PRDX4Q13162 271 aa12.3□□□□□ -0.44
SF3B5-201ENST00000367569 OR8B8Q15620 311 aa12.3□□□□□ -0.44
SF3B5-201ENST00000367569 SFRP4Q6FHJ7 346 aaPredicted RBP12.3□□□□□ -0.44
SF3B5-201ENST00000367569 GLCCI1Q86VQ1 547 aa12.3□□□□□ -0.44
SF3B5-201ENST00000367569 OR51F2Q8NH61 342 aa12.3□□□□□ -0.44
SF3B5-201ENST00000367569 CYGBQ8WWM9 190 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms