RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 J3QKU1 62 aa1.6□□□□□ -2.15
RNU4-28P-201ENST00000364739 RNF13O43567 381 aa1.6□□□□□ -2.15
RNU4-28P-201ENST00000364739 SCO1O75880 301 aa1.6□□□□□ -2.15
RNU4-28P-201ENST00000364739 CD99P14209 185 aa1.6□□□□□ -2.15
RNU4-28P-201ENST00000364739 NELFEP18615 380 aaKnown RBP1.6□□□□□ -2.15
RNU4-28P-201ENST00000364739 BCKDHBP21953 392 aa1.6□□□□□ -2.15
RNU4-28P-201ENST00000364739 HLA-DMAP28067 261 aa1.6□□□□□ -2.15
RNU4-28P-201ENST00000364739 HTR1DP28221 377 aa1.6□□□□□ -2.15
RNU4-28P-201ENST00000364739 RAB10P61026 200 aa1.6□□□□□ -2.15
RNU4-28P-201ENST00000364739 BIKQ13323 160 aa1.6□□□□□ -2.15
RNU4-28P-201ENST00000364739 PRAMEF20Q5VT98 475 aa1.6□□□□□ -2.15
RNU4-28P-201ENST00000364739 Q6ZSR6 202 aa1.6□□□□□ -2.15
RNU4-28P-201ENST00000364739 LRRC75AQ8NAA5 344 aa1.6□□□□□ -2.15
RNU4-28P-201ENST00000364739 DCAKDQ8WVC6 231 aa1.6□□□□□ -2.15
RNU4-28P-201ENST00000364739 CDS1Q92903 461 aa1.6□□□□□ -2.15
RNU4-28P-201ENST00000364739 BTN2A3PQ96KV6 586 aa1.6□□□□□ -2.15
RNU4-28P-201ENST00000364739 DUSP21Q9H596 190 aa1.6□□□□□ -2.15
RNU4-28P-201ENST00000364739 MRM3Q9HC36 420 aaKnown RBP1.6□□□□□ -2.15
RNU4-28P-201ENST00000364739 DOCK6Q96HP0 2047 aa1.6□□□□□ -2.15
RNU4-28P-201ENST00000364739 DYSFO75923 2080 aa1.6□□□□□ -2.15
RNU4-28P-201ENST00000364739 CACNA1GO43497 2377 aa1.59□□□□□ -2.15
RNU4-28P-201ENST00000364739 FBN3Q75N90 2809 aa1.59□□□□□ -2.15
RNU4-28P-201ENST00000364739 TRBV9A0A0B4J1U6 114 aa1.59□□□□□ -2.15
RNU4-28P-201ENST00000364739 CPLX1O14810 134 aa1.59□□□□□ -2.15
RNU4-28P-201ENST00000364739 CD160O95971 181 aa1.59□□□□□ -2.15
RNU4-28P-201ENST00000364739 HPRT1P00492 218 aa1.59□□□□□ -2.15
RNU4-28P-201ENST00000364739 ACOT2P49753 483 aa1.59□□□□□ -2.15
RNU4-28P-201ENST00000364739 CDH26Q8IXH8 852 aa1.59□□□□□ -2.15
RNU4-28P-201ENST00000364739 MUC7Q8TAX7 377 aa1.59□□□□□ -2.15
RNU4-28P-201ENST00000364739 IGF2BP2-AS1Q96M15 143 aa1.59□□□□□ -2.15
RNU4-28P-201ENST00000364739 ACTR3CQ9C0K3 210 aaPredicted RBP1.59□□□□□ -2.15
RNU4-28P-201ENST00000364739 ZNF302Q9NR11 478 aa1.59□□□□□ -2.15
RNU4-28P-201ENST00000364739 PTTG3PQ9NZH4 202 aa1.59□□□□□ -2.15
RNU4-28P-201ENST00000364739 HES2Q9Y543 173 aa1.59□□□□□ -2.15
RNU4-28P-201ENST00000364739 IGKV1-6A0A0C4DH72 117 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 ISPDA4D126 451 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 A6NDN8 102 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 RAD1O60671 282 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 IGKV1-39P01597 117 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 IGKV1D-39P04432 117 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 GABRG2P18507 467 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 RAB4AP20338 218 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 PBLDP30039 288 aaPredicted RBP1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 MYCNOSP40205 109 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 TGM4P49221 684 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 SERPINB8P50452 374 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 IFITM3Q01628 133 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 TTC23LQ6PF05 361 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 ORMDL3Q8N138 153 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 UBAC2Q8NBM4 344 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 SLC26A10Q8NG04 563 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 OR9G4Q8NGQ1 327 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 CMTM2Q8TAZ6 248 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 SGTBQ96EQ0 304 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 PDCD1LG2Q9BQ51 273 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 PKIBQ9C010 78 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 TOLLIPQ9H0E2 274 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 UBN2Q6ZU65 1347 aa1.58□□□□□ -2.16
RNU4-28P-201ENST00000364739 IGLV10-54A0A075B6I4 117 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 OR2AG2A6NM03 316 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 A8MWL6 223 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 SLC19A2O60779 497 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 FTH1P02794 183 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 TROVE2P10155 538 aaKnown RBP eCLIP1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 MYL2P10916 166 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 PFN2P35080 140 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 LIPEQ05469 1076 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 NAB1Q13506 487 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 ALKBH6Q3KRA9 238 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 ZNF660Q6AZW8 331 aaPredicted RBP1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 AMMECR1LQ6DCA0 310 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 APOBEC3HQ6NTF7 200 aaKnown RBP1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 BBS7Q8IWZ6 715 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 LY6G5BQ8NDX9 201 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 BPIFCQ8NFQ6 507 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 OR10W1Q8NGF6 305 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 OR5AR1Q8NGP9 310 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 OR52N1Q8NH53 320 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 OR2V2Q96R30 315 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 NUP58Q9BVL2 599 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 PIGUQ9H490 435 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 PLEKHF2Q9H8W4 249 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 TMEM165Q9HC07 324 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 CA10Q9NS85 328 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 COX16Q9P0S2 106 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 EXTL2Q9UBQ6 330 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 ZBED9Q6R2W3 1325 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 NUP205Q92621 2012 aa1.57□□□□□ -2.16
RNU4-28P-201ENST00000364739 A0A0A6YYD5 115 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 CCL15-CCL14A0A0B4J2E2 113 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 CENPBD1B2RD01 187 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 H0Y8G0 127 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 M0R3G1 203 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 AQP9O43315 295 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 HUS1O60921 280 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 TRBV12-3P01733 135 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 HBE1P02100 147 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 MMP7P09237 267 aaPredicted RBP1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 MYL9P24844 172 aa1.56□□□□□ -2.16
RNU4-28P-201ENST00000364739 GTF2E2P29084 291 aaKnown RBP1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms