RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 MOGAT2Q3SYC2 334 aa14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 Q7L0L9 218 aa14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 FAM185AQ8N0U4 392 aa14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 DNASE2O00115 360 aaPredicted RBP14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 BTCP35070 178 aa14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 FASLGP48023 281 aa14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 TMEM268Q5VZI3 342 aa14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 GGNBP1Q5YKI7 109 aa14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 LINC00469Q8N7U9 141 aa14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 ZNF383Q8NA42 475 aa14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 PRR13Q9NZ81 148 aa14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 AADACP22760 399 aa14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 CCR2P41597 374 aa14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 PNLIPRP3Q17RR3 467 aa14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 PLXDC2Q6UX71 529 aa14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 PBX4Q9BYU1 374 aa14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 ULBP2Q9BZM5 246 aa14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 MED29Q9NX70 200 aa14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 OR2M5A3KFT3 312 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 EN2P19622 333 aaPredicted RBP14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 PSMB3P49720 205 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 HSF1Q00613 529 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 TMEM176BQ3YBM2 270 aaPredicted RBP14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 TMEM215Q68D42 235 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 TMPPEQ6ZT21 453 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 NT5CQ8TCD5 201 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 TCTN2Q96GX1 697 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 HEXA-AS1Q9H8Q6 139 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 CUTCQ9NTM9 273 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 PQLC2LA1A4F0 135 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 C9J4A7 227 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 ZIC1Q15915 447 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 SP6Q3SY56 376 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 NKAIN2Q5VXU1 208 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 TMEM104Q8NE00 496 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 TSLPQ969D9 159 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 LAT2Q9GZY6 243 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 ZMIZ1Q9ULJ6 1067 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 LAMP3Q9UQV4 416 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 PIGLQ9Y2B2 252 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 DUX1O43812 170 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 SSSCA1O60232 199 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 CEACAM5P06731 702 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 MRGPREQ86SM8 312 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 PATE1Q8WXA2 126 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 MEGF10Q96KG7 1140 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 PRSS27Q9BQR3 290 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 MAGT1Q9H0U3 335 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 TRBV23-1A0A0A0MS06 115 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 CENPVL1A0A0U1RR11 272 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 C2orf72A6NCS6 295 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 NAAAQ02083 359 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 FUT5Q11128 374 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 BAHD1Q8TBE0 780 aaPredicted RBP14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 MOB1AQ9H8S9 216 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 PIPOXQ9P0Z9 390 aa14.35□□□□□ -0.11
CLSTN1-201ENST00000361311 CLDN17P56750 224 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 C17orf67Q0P5P2 114 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 CLEC18BQ6UXF7 455 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 MKXQ8IYA7 352 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 MOGAT1Q96PD6 335 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 MAP3K3Q99759 626 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 HCFC2Q9Y5Z7 792 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 OR2W5A6NFC9 320 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 PPICP45877 212 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 ELLP55199 621 aaPredicted RBP14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 NR2C2APQ86WQ0 139 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 BAGE3Q86Y29 109 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 BAGE2Q86Y30 109 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 CCL4L1Q8NHW4 92 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 RGP1Q92546 391 aaPredicted RBP14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 PDGFBP01127 241 aaPredicted RBP14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 HIST1H1DP16402 221 aaKnown RBP14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 ZNF528Q3MIS6 628 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 OR2B11Q5JQS5 317 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 JMJD6Q6NYC1 403 aaPredicted RBP14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 PLXDC1Q8IUK5 500 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 SMIM7Q9BQ49 75 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 KCNIP1Q9NZI2 227 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 NPTNQ9Y639 398 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 NSG1A0A0A6YYJ2 146 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 A0A1W2PPQ1 181 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 MPGP29372 298 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 ASCL1P50553 236 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 GRB2P62993 217 aaKnown RBP14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 COL13A1Q5TAT6 717 aaPredicted RBP14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 AADACL3Q5VUY0 350 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 VN1R4Q7Z5H5 301 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 OR51A2Q8NGJ7 313 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 SLC39A7Q92504 469 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 ANKRD9Q96BM1 317 aaPredicted RBP14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 ARHGAP5-AS1Q96IT6 56 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 TOX2Q96NM4 488 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 CNTD2Q9H8S5 307 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 TMEM100Q9NV29 134 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 KLF15Q9UIH9 416 aa14.34□□□□□ -0.11
CLSTN1-201ENST00000361311 LRRC37AA6NMS7 1700 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 FAM221AA4D161 298 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 PRAMEF26H0Y7S4 382 aa14.33□□□□□ -0.12
CLSTN1-201ENST00000361311 PIN1P1O15428 100 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms