RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 COQ8AQ8NI60 647 aa19.91■□□□□ 0.78
LDB1-201ENST00000361198 PSMF1Q92530 271 aa19.91■□□□□ 0.78
LDB1-201ENST00000361198 C1QTNF6Q9BXI9 259 aa19.91■□□□□ 0.78
LDB1-201ENST00000361198 NELFAQ9H3P2 528 aa19.91■□□□□ 0.78
LDB1-201ENST00000361198 ZMAT3Q9HA38 289 aaKnown RBP19.91■□□□□ 0.78
LDB1-201ENST00000361198 GPR84Q9NQS5 396 aa19.91■□□□□ 0.78
LDB1-201ENST00000361198 DEPPQ9NTK1 212 aa19.91■□□□□ 0.78
LDB1-201ENST00000361198 A8MXK9 166 aa19.91■□□□□ 0.78
LDB1-201ENST00000361198 F10P00742 488 aa19.91■□□□□ 0.78
LDB1-201ENST00000361198 CD8AP01732 235 aa19.91■□□□□ 0.78
LDB1-201ENST00000361198 MSR1P21757 451 aa19.91■□□□□ 0.78
LDB1-201ENST00000361198 MPGP29372 298 aa19.91■□□□□ 0.78
LDB1-201ENST00000361198 GUCA1AP43080 201 aaPredicted RBP19.91■□□□□ 0.78
LDB1-201ENST00000361198 SORDQ00796 357 aa19.91■□□□□ 0.78
LDB1-201ENST00000361198 SRSF4Q08170 494 aaKnown RBP19.91■□□□□ 0.78
LDB1-201ENST00000361198 ATPAF1Q5TC12 328 aaPredicted RBP19.91■□□□□ 0.78
LDB1-201ENST00000361198 ZNF529Q6P280 563 aa19.91■□□□□ 0.78
LDB1-201ENST00000361198 OR5M9Q8NGP3 310 aa19.91■□□□□ 0.78
LDB1-201ENST00000361198 ZNF775Q96BV0 537 aaPredicted RBP19.91■□□□□ 0.78
LDB1-201ENST00000361198 MFFQ9GZY8 342 aa19.91■□□□□ 0.78
LDB1-201ENST00000361198 TRAV14DV4A0A0A6YYC5 116 aa19.9■□□□□ 0.78
LDB1-201ENST00000361198 LRRC3CA6NJW4 275 aa19.9■□□□□ 0.78
LDB1-201ENST00000361198 SMAD9O15198 467 aaKnown RBP19.9■□□□□ 0.78
LDB1-201ENST00000361198 RAB3AP20336 220 aa19.9■□□□□ 0.78
LDB1-201ENST00000361198 ZNF133P52736 654 aaPredicted RBP19.9■□□□□ 0.78
LDB1-201ENST00000361198 ZNF283Q8N7M2 679 aa19.9■□□□□ 0.78
LDB1-201ENST00000361198 AQP3Q92482 292 aa19.9■□□□□ 0.78
LDB1-201ENST00000361198 LOXL4Q96JB6 756 aa19.9■□□□□ 0.78
LDB1-201ENST00000361198 LINC00052Q96N35 136 aa19.9■□□□□ 0.78
LDB1-201ENST00000361198 KLK13Q9UKR3 277 aa19.9■□□□□ 0.78
LDB1-201ENST00000361198 GJE1A6NN92 205 aa19.9■□□□□ 0.78
LDB1-201ENST00000361198 HOXD4P09016 255 aaPredicted RBP19.9■□□□□ 0.78
LDB1-201ENST00000361198 TAGLNQ01995 201 aaKnown RBP19.9■□□□□ 0.78
LDB1-201ENST00000361198 ENDOGQ14249 297 aaKnown RBP19.9■□□□□ 0.78
LDB1-201ENST00000361198 RAB12Q6IQ22 244 aa19.9■□□□□ 0.78
LDB1-201ENST00000361198 FAM57BQ71RH2 274 aa19.9■□□□□ 0.78
LDB1-201ENST00000361198 OVCH2Q7RTZ1 564 aa19.9■□□□□ 0.78
LDB1-201ENST00000361198 SLC51BQ86UW2 128 aa19.9■□□□□ 0.78
LDB1-201ENST00000361198 LRRC18Q8N456 261 aa19.9■□□□□ 0.78
LDB1-201ENST00000361198 SLC22A24Q8N4F4 322 aa19.9■□□□□ 0.78
LDB1-201ENST00000361198 PAQR4Q8N4S7 273 aaPredicted RBP19.9■□□□□ 0.78
LDB1-201ENST00000361198 OR13C8Q8NGS7 320 aa19.9■□□□□ 0.78
LDB1-201ENST00000361198 NABP1Q96AH0 204 aa19.9■□□□□ 0.78
LDB1-201ENST00000361198 LIN37Q96GY3 246 aaPredicted RBP19.9■□□□□ 0.78
LDB1-201ENST00000361198 RBM24Q9BX46 236 aaKnown RBP19.9■□□□□ 0.78
LDB1-201ENST00000361198 B3GNT4Q9C0J1 378 aa19.9■□□□□ 0.78
LDB1-201ENST00000361198 PPA2Q9H2U2 334 aa19.9■□□□□ 0.78
LDB1-201ENST00000361198 SLC2A8Q9NY64 477 aa19.9■□□□□ 0.78
LDB1-201ENST00000361198 FOXD3Q9UJU5 478 aaPredicted RBP19.9■□□□□ 0.78
LDB1-201ENST00000361198 E9PLN8 166 aa19.89■□□□□ 0.77
LDB1-201ENST00000361198 DHHO43323 396 aa19.89■□□□□ 0.77
LDB1-201ENST00000361198 ZNF20P17024 532 aa19.89■□□□□ 0.77
LDB1-201ENST00000361198 RAC3P60763 192 aa19.89■□□□□ 0.77
LDB1-201ENST00000361198 GRB2P62993 217 aaKnown RBP19.89■□□□□ 0.77
LDB1-201ENST00000361198 RNF144BQ7Z419 303 aa19.89■□□□□ 0.77
LDB1-201ENST00000361198 BPIFB2Q8N4F0 458 aa19.89■□□□□ 0.77
LDB1-201ENST00000361198 NKD1Q969G9 470 aa19.89■□□□□ 0.77
LDB1-201ENST00000361198 FAM71F1Q96KD3 344 aaPredicted RBP19.89■□□□□ 0.77
LDB1-201ENST00000361198 SLC5A6Q9Y289 635 aa19.89■□□□□ 0.77
LDB1-201ENST00000361198 SESN1Q9Y6P5 492 aa19.89■□□□□ 0.77
LDB1-201ENST00000361198 RAB27BO00194 218 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 CYB561P49447 251 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 UNC119Q13432 240 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 GFOD2Q3B7J2 385 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 FOXL2NBQ6ZUU3 175 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 TMED4Q7Z7H5 227 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 GGNQ86UU5 652 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 NAA40Q86UY6 237 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 ACBD4Q8NC06 268 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 ZNF837Q96EG3 531 aaPredicted RBP19.88■□□□□ 0.77
LDB1-201ENST00000361198 PFDN2Q9UHV9 154 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 RAB22AQ9UL26 194 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 R4GN57 208 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 OR14I1A6ND48 311 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 TMEM235A6NFC5 223 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 WIPF3A6NGB9 483 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 KRBOX1C9JBD0 128 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 MPZP25189 248 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 AGTR1P30556 359 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 DHRS2Q13268 280 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 TUSC1Q2TAM9 212 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 ZNF260Q3ZCT1 412 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 OR5M8Q8NGP6 311 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 SPACA5Q96QH8 159 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 SLC6A7Q99884 636 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 UQCC2Q9BRT2 126 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 RYDENQ9NUL5 291 aaKnown RBP19.88■□□□□ 0.77
LDB1-201ENST00000361198 CELSR3Q9NYQ7 3312 aa19.88■□□□□ 0.77
LDB1-201ENST00000361198 C5orf63A6NC05 138 aa19.87■□□□□ 0.77
LDB1-201ENST00000361198 PINLYPA6NC86 204 aa19.87■□□□□ 0.77
LDB1-201ENST00000361198 METTL21EPA6NDL7 271 aa19.87■□□□□ 0.77
LDB1-201ENST00000361198 BET1O15155 118 aa19.87■□□□□ 0.77
LDB1-201ENST00000361198 FGF2P09038 288 aa19.87■□□□□ 0.77
LDB1-201ENST00000361198 NUP62P37198 522 aaPredicted RBP19.87■□□□□ 0.77
LDB1-201ENST00000361198 STARP49675 285 aa19.87■□□□□ 0.77
LDB1-201ENST00000361198 MEF2DQ14814 521 aa19.87■□□□□ 0.77
LDB1-201ENST00000361198 WIPI1Q5MNZ9 446 aaPredicted RBP19.87■□□□□ 0.77
LDB1-201ENST00000361198 LPCAT3Q6P1A2 487 aa19.87■□□□□ 0.77
LDB1-201ENST00000361198 EIF4E3Q8N5X7 224 aaKnown RBP19.87■□□□□ 0.77
LDB1-201ENST00000361198 GJC3Q8NFK1 279 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms