RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 C12orf49Q9H741 205 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 TMEM9BQ9NQ34 198 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 ERV3-1Q14264 604 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 HLA-BQ31612 363 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 TWSG1Q9GZX9 223 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 IL21Q9HBE4 155 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 EIF4E2O60573 245 aaKnown RBP8.45□□□□□ -1.06
VPS13A-203ENST00000360280 FGF2P09038 288 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 SNRPNP63162 240 aaKnown RBP8.45□□□□□ -1.06
VPS13A-203ENST00000360280 LSM11P83369 360 aaKnown RBP eCLIP8.45□□□□□ -1.06
VPS13A-203ENST00000360280 OR1C1Q15619 314 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 ARRDC1Q8N5I2 433 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 ARRDC5A6NEK1 342 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 TLCD2A6NGC4 264 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 ZNF785A8K8V0 405 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 IL10RAQ13651 578 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 OR2B11Q5JQS5 317 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 OR1L4Q8NGR5 311 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 SCMH1Q96GD3 660 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 LYRM4Q9HD34 91 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 B4DEV8 164 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 MS4A18H0YCH9 400 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 MS4A18Q3C1V0 323 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 HSD11B1LQ7Z5J1 315 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 SMIM4Q8WVI0 70 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 DUS3LQ96G46 650 aaKnown RBP8.45□□□□□ -1.06
VPS13A-203ENST00000360280 TOE1Q96GM8 510 aaKnown RBP8.45□□□□□ -1.06
VPS13A-203ENST00000360280 PACRGQ96M98 296 aaPredicted RBP8.45□□□□□ -1.06
VPS13A-203ENST00000360280 RRP8O43159 456 aaKnown RBP8.45□□□□□ -1.06
VPS13A-203ENST00000360280 EPHA2P29317 976 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 INPP5JQ15735 1006 aaPredicted RBP8.45□□□□□ -1.06
VPS13A-203ENST00000360280 C21orf62-AS1Q17RA5 79 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 OR2D3Q8NGH3 330 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 POM121Q96HA1 1249 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 GRAMD2BQ96HH9 432 aa8.45□□□□□ -1.06
VPS13A-203ENST00000360280 F5H697 171 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 ACOT8O14734 319 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 RHOBP62745 196 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 LRRC15Q8TF66 581 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 CGB2Q6NT52 195 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 PLPP6Q8IY26 295 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 SLAMF6Q96DU3 332 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 GABARAPL3Q9BY60 117 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 MRPL13Q9BYD1 178 aaKnown RBP8.44□□□□□ -1.06
VPS13A-203ENST00000360280 AMDHD2Q9Y303 409 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 SMAD6O43541 496 aaKnown RBP8.44□□□□□ -1.06
VPS13A-203ENST00000360280 ZNF385BQ569K4 471 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 SLC48A1Q6P1K1 146 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 RTN4IP1Q8WWV3 396 aaPredicted RBP8.44□□□□□ -1.06
VPS13A-203ENST00000360280 SPRED3Q2MJR0 410 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 ZNF511Q8NB15 262 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 OR6C1Q96RD1 312 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 SEBOXQ9HB31 216 aaPredicted RBP8.44□□□□□ -1.06
VPS13A-203ENST00000360280 UQCC1Q9NVA1 299 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 LHX3Q9UBR4 397 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 COA3Q9Y2R0 106 aaPredicted RBP8.44□□□□□ -1.06
VPS13A-203ENST00000360280 DNPH1O43598 174 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 SLC25A5P05141 298 aaKnown RBP8.44□□□□□ -1.06
VPS13A-203ENST00000360280 PGA3P0DJD8 388 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 CYBAP13498 195 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 NID1P14543 1247 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 UQCRFS1P47985 274 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 MS4A8Q9BY19 250 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 OR2J1Q9GZK6 312 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 HRASP01112 189 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 IGSF11Q5DX21 431 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 NARFLQ9H6Q4 476 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 ASIC5Q9NY37 505 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 HIST1H1CP16403 213 aaKnown RBP8.44□□□□□ -1.06
VPS13A-203ENST00000360280 C6orf201Q7Z4U5 140 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 OR52N4Q8NGI2 321 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 PPP1CAP62136 330 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 GLIPR2Q9H4G4 154 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 ITGB4P16144 1822 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 PARS2Q7L3T8 475 aaKnown RBP8.44□□□□□ -1.06
VPS13A-203ENST00000360280 MRPL37Q9BZE1 423 aaKnown RBP8.44□□□□□ -1.06
VPS13A-203ENST00000360280 ZNF552Q9H707 407 aaPredicted RBP8.44□□□□□ -1.06
VPS13A-203ENST00000360280 CXorf36Q9H7Y0 433 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 RBBP6Q7Z6E9 1792 aaKnown RBP8.44□□□□□ -1.06
VPS13A-203ENST00000360280 A0A1B0GX78 115 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 TNFRSF10CO14798 259 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 MBTPS2O43462 519 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 PVRP15151 417 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 OSR2Q8N2R0 312 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 MARCH1Q8TCQ1 289 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 TMED3Q9Y3Q3 217 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 HEATR5BQ9P2D3 2071 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 RGPD4Q7Z3J3 1758 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 SIGLEC6O43699 453 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 DLX1P56177 255 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 SNRPEP62304 92 aaKnown RBP8.44□□□□□ -1.06
VPS13A-203ENST00000360280 ELAVL1Q15717 326 aaKnown RBP8.44□□□□□ -1.06
VPS13A-203ENST00000360280 TTC32Q5I0X7 151 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 ADAMTSL4Q6UY14 1074 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 OR4A4PQ8NGN8 299 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 GPX7Q96SL4 187 aaPredicted RBP8.44□□□□□ -1.06
VPS13A-203ENST00000360280 C16orf70Q9BSU1 422 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 EDEM2Q9BV94 578 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 TRGV10A0A0A0MS01 117 aa8.44□□□□□ -1.06
VPS13A-203ENST00000360280 SLC10A3P09131 477 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms