RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 FAM26EQ8N5C1 309 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 MISP3Q96FF7 219 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 NUDT9Q9BW91 350 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 SLC2A9Q9NRM0 540 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 PRSS37A4D1T9 235 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 PYCARD-AS1I3L0S3 204 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 TUSC1Q2TAM9 212 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 ALKAL1Q6UXT8 129 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 EXD3Q8N9H8 876 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 ANGPTL6Q8NI99 470 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 BLNKQ8WV28 456 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 YIPF6Q96EC8 236 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 RSRP1Q9BUV0 290 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 S1PR5Q9H228 398 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 DUS4LO95620 317 aaKnown RBP14.5□□□□□ -0.09
COL18A1-203ENST00000359759 OR5AL1P0C617 328 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 DHRS4L2Q6PKH6 230 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 MYPOPQ86VE0 399 aaPredicted RBP14.5□□□□□ -0.09
COL18A1-203ENST00000359759 OR1N1Q8NGS0 311 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 SMIM19Q96E16 107 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 HES7Q9BYE0 225 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 A4GNTQ9UNA3 340 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 PMS2P1A4D2B8 440 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 LRRC3CA6NJW4 275 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 KLKB1P03952 638 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 AVPR2P30518 371 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 FAM3AP98173 230 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 C21orf62-AS1Q17RA5 79 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 GABARAPL1Q9H0R8 117 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 GPANK1O95872 356 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 SNRPEP62304 92 aaKnown RBP14.5□□□□□ -0.09
COL18A1-203ENST00000359759 PMS2P11Q13670 270 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 OTUD1Q5VV17 481 aaPredicted RBP14.5□□□□□ -0.09
COL18A1-203ENST00000359759 GGNBP1Q5YKI7 109 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 RPS19BP1Q86WX3 136 aaKnown RBP14.5□□□□□ -0.09
COL18A1-203ENST00000359759 KCND3Q9UK17 655 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 DAPP1Q9UN19 280 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 RAB7AP51149 207 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 FFAR4Q5NUL3 377 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 A0A1B0GTQ1 180 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 POM121BA6NF01 834 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 MYOGP15173 224 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 B4GALT1P15291 398 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 DIO1P49895 249 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 ELAVL1Q15717 326 aaKnown RBP14.5□□□□□ -0.09
COL18A1-203ENST00000359759 TMEM52BQ4KMG9 183 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 XKR7Q5GH72 579 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 EMC4Q5J8M3 183 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 C17orf78Q8N4C9 275 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 ARIH2OSQ8N7S6 290 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 MYO18AQ92614 2054 aaKnown RBP14.5□□□□□ -0.09
COL18A1-203ENST00000359759 OSR2Q8N2R0 312 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 RTN4IP1Q8WWV3 396 aaPredicted RBP14.5□□□□□ -0.09
COL18A1-203ENST00000359759 JAM3Q9BX67 310 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 CDCA4Q9BXL8 241 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 ONECUT1Q9UBC0 465 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 FZR1Q9UM11 496 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 PROCRQ9UNN8 238 aa14.5□□□□□ -0.09
COL18A1-203ENST00000359759 SLC17A1Q14916 467 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 STUMQ69YW2 141 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 PLPP6Q8IY26 295 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 IL22RA2Q969J5 263 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 FOXQ1Q9C009 403 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 NARFLQ9H6Q4 476 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 OR1A1Q9P1Q5 309 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 F5H697 171 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 TMPRSS11DO60235 418 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 FCMRO60667 390 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 POU3F3P20264 500 aaPredicted RBP14.49□□□□□ -0.09
COL18A1-203ENST00000359759 Q56UQ5 140 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 METRNLQ641Q3 311 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 SLC25A43Q8WUT9 341 aaPredicted RBP14.49□□□□□ -0.09
COL18A1-203ENST00000359759 SIGLEC11Q96RL6 698 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 GAL3ST2Q9H3Q3 398 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 NAT8BQ9UHF3 227 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 DUSP8Q13202 625 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 OR2A2Q6IF42 318 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 CRYGNQ8WXF5 182 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 C19orf53Q9UNZ5 99 aaPredicted RBP14.49□□□□□ -0.09
COL18A1-203ENST00000359759 DEFB108AA8MXU0 73 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 RRP8O43159 456 aaKnown RBP14.49□□□□□ -0.09
COL18A1-203ENST00000359759 LIMK1P53667 647 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 CIB3Q96Q77 187 aaPredicted RBP14.49□□□□□ -0.09
COL18A1-203ENST00000359759 IFT22Q9H7X7 185 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 ASB1Q9Y576 335 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 LTBP3Q9NS15 1303 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 ZBTB25P24278 435 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 RPS23P62266 143 aaKnown RBP14.49□□□□□ -0.09
COL18A1-203ENST00000359759 PAX5Q02548 391 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 IL10RAQ13651 578 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 NPTNQ9Y639 398 aa14.49□□□□□ -0.09
COL18A1-203ENST00000359759 SNRPGP15A8MWD9 76 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 PTHLHP12272 177 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 CDK5R1Q15078 307 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 IQCJQ1A5X6 159 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 AGBL4Q5VU57 503 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 TCRBV5S2A0A599 114 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 GAMTQ14353 236 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 C11orf87Q6NUJ2 197 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 HGDQ93099 445 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms