RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 AVPI1Q5T686 147 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 ASPHD2Q6ICH7 369 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 ASCL5Q7RTU5 278 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 DND1Q8IYX4 353 aaKnown RBP11.16□□□□□ -0.62
GGPS1-202ENST00000358966 ZIC4Q8N9L1 334 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 OR2T35Q8NGX2 323 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 OR6N1Q8NGY5 312 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 KIAA1143Q96AT1 154 aaPredicted RBP11.16□□□□□ -0.62
GGPS1-202ENST00000358966 ALKBH3Q96Q83 286 aaPredicted RBP11.16□□□□□ -0.62
GGPS1-202ENST00000358966 SOX7Q9BT81 388 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 TTTY12Q9BZ98 90 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 ZNF703Q9H7S9 590 aaPredicted RBP11.16□□□□□ -0.62
GGPS1-202ENST00000358966 EXTL2Q9UBQ6 330 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 TM4SF5O14894 197 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 WISP2O76076 250 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 CNR1P21554 472 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 PRKXP51817 358 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 CARD18P57730 90 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 PLA2G7Q13093 441 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 PPA1Q15181 289 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 Q499Y3 187 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 SFRP5Q5T4F7 317 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 MYO7BQ6PIF6 2116 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 SERPINA12Q8IW75 414 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 OR10H5Q8NGA6 315 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 OR6X1Q8NH79 312 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 LGALS14Q8TCE9 139 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 DCBLD2Q96PD2 775 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 CRLF2Q9HC73 371 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 TNRC6AQ8NDV7 1962 aaKnown RBP11.15□□□□□ -0.62
GGPS1-202ENST00000358966 C5orf63A6NC05 138 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 SERPINA3P01011 423 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 SPINK2P20155 84 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 CCL11P51671 97 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 TRAM1Q15629 374 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 DNM1P34Q6PK57 102 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 UXS1Q8NBZ7 420 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 OR1S1Q8NH92 325 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 RNF128Q8TEB7 428 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 SLAMF6Q96DU3 332 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 OR2M2Q96R28 347 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 RBM24Q9BX46 236 aaKnown RBP11.15□□□□□ -0.62
GGPS1-202ENST00000358966 OR51J1Q9H342 316 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 TREM2Q9NZC2 230 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 LIPGQ9Y5X9 500 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 NPIPB13A6NJU9 1138 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 NPIPB4C9JG80 1138 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 GPR31O00270 319 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 TCAPO15273 167 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 GPRIN2O60269 458 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 ARL6IP5O75915 188 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 ZNF17P17021 662 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 CASRP41180 1078 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 EVX1P49640 407 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 GFRA1P56159 465 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 TSPAN5P62079 268 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 PPP3R1P63098 170 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 GK2Q14410 553 aaPredicted RBP11.15□□□□□ -0.62
GGPS1-202ENST00000358966 RNF212Q495C1 297 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 THEM4Q5T1C6 240 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 CD276Q5ZPR3 534 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 UNQ9370/PRO34162Q6UXP9 181 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 STAC2Q6ZMT1 411 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 LDLRAD3Q86YD5 345 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 SCMH1Q96GD3 660 aa11.15□□□□□ -0.62
GGPS1-202ENST00000358966 GDF2Q9UK05 429 aaPredicted RBP11.15□□□□□ -0.62
GGPS1-202ENST00000358966 TMEM269A0A1B0GVZ9 245 aa11.15□□□□□ -0.63
GGPS1-202ENST00000358966 C7orf66A4D0T2 115 aa11.15□□□□□ -0.63
GGPS1-202ENST00000358966 LANCL1O43813 399 aa11.15□□□□□ -0.63
GGPS1-202ENST00000358966 FZD7O75084 574 aa11.15□□□□□ -0.63
GGPS1-202ENST00000358966 PTHLHP12272 177 aa11.15□□□□□ -0.63
GGPS1-202ENST00000358966 CSNK1A1P48729 337 aa11.15□□□□□ -0.63
GGPS1-202ENST00000358966 ROM1Q03395 351 aa11.15□□□□□ -0.63
GGPS1-202ENST00000358966 HYAL4Q2M3T9 481 aa11.15□□□□□ -0.63
GGPS1-202ENST00000358966 GFOD2Q3B7J2 385 aa11.15□□□□□ -0.63
GGPS1-202ENST00000358966 RNFT1Q5M7Z0 435 aa11.15□□□□□ -0.63
GGPS1-202ENST00000358966 KCTD18Q6PI47 426 aaPredicted RBP11.15□□□□□ -0.63
GGPS1-202ENST00000358966 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.15□□□□□ -0.63
GGPS1-202ENST00000358966 TMPRSS12Q86WS5 348 aa11.15□□□□□ -0.63
GGPS1-202ENST00000358966 TMEM251Q8N6I4 163 aa11.15□□□□□ -0.63
GGPS1-202ENST00000358966 ADPRHL1Q8NDY3 354 aa11.15□□□□□ -0.63
GGPS1-202ENST00000358966 CPNE4Q96A23 557 aaPredicted RBP11.15□□□□□ -0.63
GGPS1-202ENST00000358966 KCNJ15Q99712 375 aa11.15□□□□□ -0.63
GGPS1-202ENST00000358966 COMMD4Q9H0A8 199 aa11.15□□□□□ -0.63
GGPS1-202ENST00000358966 DLL3Q9NYJ7 618 aa11.15□□□□□ -0.63
GGPS1-202ENST00000358966 SCP2D1Q9UJQ7 156 aa11.15□□□□□ -0.63
GGPS1-202ENST00000358966 G3V3Q6 166 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 P2RY10O00398 339 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 H2BFMP0C1H6 154 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 PATE4P0C8F1 98 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 PRSS12P56730 875 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 CSNK2A1P68400 391 aaPredicted RBP11.14□□□□□ -0.63
GGPS1-202ENST00000358966 PLGLB1Q02325 96 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 ECH1Q13011 328 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 AARDQ4LEZ3 155 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 SLC25A47Q6Q0C1 308 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 NAA40Q86UY6 237 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 PDZD9Q8IXQ8 264 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 PLPP7Q8NBV4 271 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 OR51A2Q8NGJ7 313 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms