RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 SUSD5O60279 629 aa5.96□□□□□ -1.45
VPS13B-202ENST00000357162 WNT11O96014 354 aa5.96□□□□□ -1.45
VPS13B-202ENST00000357162 AKR1C3P42330 323 aa5.96□□□□□ -1.45
VPS13B-202ENST00000357162 RAB7AP51149 207 aa5.96□□□□□ -1.45
VPS13B-202ENST00000357162 SECTM1Q8WVN6 248 aa5.96□□□□□ -1.45
VPS13B-202ENST00000357162 TM4SF18Q96CE8 201 aa5.96□□□□□ -1.45
VPS13B-202ENST00000357162 ULBP2Q9BZM5 246 aa5.96□□□□□ -1.45
VPS13B-202ENST00000357162 FTSJ1Q9UET6 329 aa5.96□□□□□ -1.45
VPS13B-202ENST00000357162 HLA-DQA1P01909 254 aa5.96□□□□□ -1.45
VPS13B-202ENST00000357162 INHBBP09529 407 aa5.96□□□□□ -1.45
VPS13B-202ENST00000357162 GJA5P36382 358 aa5.96□□□□□ -1.45
VPS13B-202ENST00000357162 CXorf36Q9H7Y0 433 aa5.96□□□□□ -1.45
VPS13B-202ENST00000357162 OCIAD1Q9NX40 245 aa5.96□□□□□ -1.45
VPS13B-202ENST00000357162 M0R1X1 148 aa5.96□□□□□ -1.45
VPS13B-202ENST00000357162 RPLP1P05386 114 aaKnown RBP5.96□□□□□ -1.45
VPS13B-202ENST00000357162 EPHA1P21709 976 aa5.96□□□□□ -1.45
VPS13B-202ENST00000357162 LIPNQ5VXI9 398 aa5.96□□□□□ -1.45
VPS13B-202ENST00000357162 ZNF66Q6ZN08 573 aa5.96□□□□□ -1.45
VPS13B-202ENST00000357162 APH1AQ96BI3 265 aa5.96□□□□□ -1.45
VPS13B-202ENST00000357162 SSUH2Q9Y2M2 353 aa5.96□□□□□ -1.45
VPS13B-202ENST00000357162 A0A1W2PPQ1 181 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 TMEM250H0YL14 139 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 INPP5JQ15735 1006 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-202ENST00000357162 PRSS54Q6PEW0 395 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 PTOV1Q86YD1 416 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 WDR89Q96FK6 387 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-202ENST00000357162 USP36Q9P275 1121 aaKnown RBP5.96□□□□□ -1.46
VPS13B-202ENST00000357162 TANC2Q9HCD6 1990 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 TMEM210A6NLX4 147 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 GALNSP34059 522 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 FABP9Q0Z7S8 132 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 PMCHL1Q16048 86 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 FFAR4Q5NUL3 377 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 SHEQ5VZ18 495 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 TMEM81Q6P7N7 255 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 GPRIN1Q7Z2K8 1008 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 A0A0B4J203 849 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 H0YGG7 62 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 SH2D1BO14796 132 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 CTSDP07339 412 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-202ENST00000357162 PPICP45877 212 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 NSUN5P2Q63ZY6 315 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 TMEM71Q6P5X7 295 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 FAM71F1Q96KD3 344 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-202ENST00000357162 TIMM10BQ9Y5J6 103 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 IGLV3-16A0A075B6K0 115 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 OR52A4PA6NMU1 304 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 ADM5C9JUS6 153 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 SORBS2O94875 1100 aaKnown RBP5.96□□□□□ -1.46
VPS13B-202ENST00000357162 OMGP23515 440 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 SYPL1Q16563 259 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 ANKLE1Q8NAG6 615 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 ADTRPQ96IZ2 230 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 GPR137Q96N19 417 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 RBM14Q96PK6 669 aaKnown RBP5.96□□□□□ -1.46
VPS13B-202ENST00000357162 NUDT22Q9BRQ3 303 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 FAAP24Q9BTP7 215 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 GDF2Q9UK05 429 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-202ENST00000357162 ISLRO14498 428 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 IGLV3-27P01718 113 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 POLR2IP36954 125 aaKnown RBP5.96□□□□□ -1.46
VPS13B-202ENST00000357162 GGNBP1Q5YKI7 109 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 FAM57BQ71RH2 274 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 APCDD1Q8J025 514 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 CLDND1Q9NY35 253 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 PIGLQ9Y2B2 252 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 FGF18O76093 207 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 PFN3P60673 137 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 IKZF1Q13422 519 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 C2orf76Q3KRA6 126 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 IL22RA1Q8N6P7 574 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 BSCL2Q96G97 398 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-202ENST00000357162 OR10C1Q96KK4 312 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 NAT8Q9UHE5 227 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 ARHGAP21Q5T5U3 1957 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 CRHP06850 196 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 GUSBP08236 651 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 FOLR3P41439 243 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 LEXMQ3ZCV2 418 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 H1FOOQ8IZA3 346 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-202ENST00000357162 SLC24A4Q8NFF2 622 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 OR8D4Q8NGM9 314 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 OR2A1Q8NGT9 310 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 AKR1E2Q96JD6 320 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 MAGT1Q9H0U3 335 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 MIOXQ9UGB7 285 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 A0A1B0GU03 582 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 HRASP01112 189 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 IGHA2P01877 340 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 SLC2A1P11166 492 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 SIM1P81133 766 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-202ENST00000357162 WDR74Q6RFH5 385 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-202ENST00000357162 FJX1Q86VR8 437 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 ABHD1Q96SE0 405 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 NIPSNAP1Q9BPW8 284 aa5.96□□□□□ -1.46
VPS13B-202ENST00000357162 DDX60LQ5H9U9 1706 aaKnown RBP5.96□□□□□ -1.46
VPS13B-202ENST00000357162 MAP1LC3B2A6NCE7 125 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 PCBP4P57723 403 aaKnown RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 MRPS21P82921 87 aaKnown RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 FUT7Q11130 342 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms