RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 TLE4Q04727 773 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 ALKBH1Q13686 389 aaKnown RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 CDK5R1Q15078 307 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 SWI5Q1ZZU3 235 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 KCTD21Q4G0X4 260 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 RNLSQ5VYX0 342 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 DRAM2Q6UX65 266 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 PHC2Q8IXK0 858 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 SYS1Q8N2H4 156 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 OR51A2Q8NGJ7 313 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 OR52N1Q8NH53 320 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 ZFAND2BQ8WV99 257 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 IGFBPL1Q8WX77 278 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 ASB17Q8WXJ9 295 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 MYDGFQ969H8 173 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 SPTSSAQ969W0 71 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 SPSB4Q96A44 273 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 NUFIP1Q9UHK0 495 aaKnown RBP3.44□□□□□ -1.86
LIG4-201ENST00000356922 ERGIC3Q9Y282 383 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 RNF115Q9Y4L5 304 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 CACNG2Q9Y698 323 aa3.44□□□□□ -1.86
LIG4-201ENST00000356922 SONP18583 2426 aaKnown RBP3.43□□□□□ -1.86
LIG4-201ENST00000356922 LOC100289279A0A1B0GTE1 492 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 hCG_38984A0A1B0GV85 526 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 A0A1W2PPW3 197 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 ACOD1A6NK06 481 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 LOC110117498-PIK3R3F6TDL0 507 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 CD3EP07766 207 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 TTKP33981 857 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 GLRXP35754 106 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 CDKN1AP38936 164 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 SOX2P48431 317 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 GSK3AP49840 483 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 GRB2P62993 217 aaKnown RBP3.43□□□□□ -1.86
LIG4-201ENST00000356922 CSNK2BP67870 215 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 ACTC1P68032 377 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 ACTA1P68133 377 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 FABP5Q01469 135 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 MALLQ13021 153 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 MAB21L1Q13394 359 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 UBE2V2Q15819 145 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 TSTQ16762 297 aaKnown RBP3.43□□□□□ -1.86
LIG4-201ENST00000356922 ARMCX4Q5H9R4 360 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 UBE2UQ5VVX9 321 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 FDX2Q6P4F2 183 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 WDR86Q86TI4 376 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 NR2C2APQ86WQ0 139 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 KLHL36Q8N4N3 616 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 PLPP7Q8NBV4 271 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 OR10AD1Q8NGE0 317 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 OR1J2Q8NGS2 313 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 REEP6Q96HR9 211 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 COG8Q96MW5 612 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 SPACA5Q96QH8 159 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 TMED9Q9BVK6 235 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 DYNLRB1Q9NP97 96 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 KCNN3Q9UGI6 736 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 ITGB1BP2Q9UKP3 347 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 EXOSC1Q9Y3B2 195 aaKnown RBP3.43□□□□□ -1.86
LIG4-201ENST00000356922 ARHGAP32A7KAX9 2087 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 IGLV3-9A0A075B6K5 115 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 IGKV1-27A0A075B6S5 117 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 TRAV8-7A0A075B6U6 113 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 SMIM30A4D0T7 59 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 CCDC160A6NGH7 325 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 PLPP2O43688 288 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 ZNF254O75437 659 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 GPX5O75715 221 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 SC5DO75845 299 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 TNFAIP8O95379 198 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 MT-ND5P03915 603 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 TACSTD2P09758 323 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 CA6P23280 308 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 DCTDP32321 178 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 SERPINF1P36955 418 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 TGM4P49221 684 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 GABARAPL2P60520 117 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 ECH1Q13011 328 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 MPPED2Q15777 294 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 TBCEQ15813 527 aaPredicted RBP3.43□□□□□ -1.86
LIG4-201ENST00000356922 TIGD6Q17RP2 521 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 NKPD1Q17RQ9 610 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 C3orf36Q3SXR2 165 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 CEP78Q5JTW2 689 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 TMPRSS11AQ6ZMR5 421 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 OR56B2PQ8NGI1 322 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 OR14K1Q8NGZ2 314 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 APOBEC3DQ96AK3 386 aaPredicted RBP3.43□□□□□ -1.86
LIG4-201ENST00000356922 HAVCR1Q96D42 359 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 SEH1LQ96EE3 360 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 PGAM5Q96HS1 289 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 OR14A2Q96R54 314 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 NR1H4Q96RI1 486 aaPredicted RBP3.43□□□□□ -1.86
LIG4-201ENST00000356922 VRK1Q99986 396 aaPredicted RBP3.43□□□□□ -1.86
LIG4-201ENST00000356922 YTHDF1Q9BYJ9 559 aaKnown RBP3.43□□□□□ -1.86
LIG4-201ENST00000356922 OR51E2Q9H255 320 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 TPK1Q9H3S4 243 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 NIPAL2Q9H841 368 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 UBTD1Q9HAC8 227 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 PLEKHA1Q9HB21 404 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms