RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 ARPC3O15145 178 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 PHLDA2Q53GA4 152 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 KISS1RQ969F8 398 aaPredicted RBP11.05□□□□□ -0.64
COLCA1-201ENST00000355430 TCEAL7Q9BRU2 100 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 SLC25A31Q9H0C2 315 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 PRMT8Q9NR22 394 aaPredicted RBP11.05□□□□□ -0.64
COLCA1-201ENST00000355430 MRM2Q9UI43 246 aaKnown RBP11.05□□□□□ -0.64
COLCA1-201ENST00000355430 CES1P1Q9UKY3 287 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 SF3B6Q9Y3B4 125 aaKnown RBP11.05□□□□□ -0.64
COLCA1-201ENST00000355430 M0R1B8 84 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 AQP8O94778 261 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 ZNF44P15621 663 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 HMGN3Q15651 99 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 ANKRD16Q6P6B7 361 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 CLRN3Q8NCR9 226 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 OR2Y1Q8NGV0 311 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 PRR7Q8TB68 274 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 ST7LQ8TDW4 575 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 ZCCHC14Q8WYQ9 949 aaKnown RBP11.05□□□□□ -0.64
COLCA1-201ENST00000355430 HAS2Q92819 552 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 C4orf45Q96LM5 186 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 NMNAT2Q9BZQ4 307 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 ELF5Q9UKW6 265 aaPredicted RBP11.05□□□□□ -0.64
COLCA1-201ENST00000355430 SMCO3A2RU48 225 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 B4E171 279 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 SERPINE2P07093 398 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 TSPAN7P41732 249 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 ALDH3B1P43353 468 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 RPS18P62269 152 aaKnown RBP11.05□□□□□ -0.64
COLCA1-201ENST00000355430 MFAP5Q13361 173 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 CLINT1Q14677 625 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.05□□□□□ -0.64
COLCA1-201ENST00000355430 OR14K1Q8NGZ2 314 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 ASB13Q8WXK3 278 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 ZNF681Q96N22 645 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 MOGAT1Q96PD6 335 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 NUDT9Q9BW91 350 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 ZCCHC4Q9H5U6 513 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 ST6GALNAC2Q9UJ37 374 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 PCM1Q15154 2024 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 FAM90A27PA6NNH2 459 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 BET1O15155 118 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 CXCL13O43927 109 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 BPNT1O95861 308 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 TBXA2RP21731 343 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 PEBP1P30086 187 aaKnown RBP11.05□□□□□ -0.64
COLCA1-201ENST00000355430 ARR3P36575 388 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 DMRTC1Q5HYR2 192 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 PRSS35Q8N3Z0 413 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 KCNJ15Q99712 375 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 VN1R1Q9GZP7 353 aa11.05□□□□□ -0.64
COLCA1-201ENST00000355430 TCRBV16S1A1N1A0A5B0 115 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 OTOL1A6NHN0 477 aaPredicted RBP11.04□□□□□ -0.64
COLCA1-201ENST00000355430 ANKRD34CP0C6C1 535 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 PPP1CAP62136 330 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 MESP2Q0VG99 397 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 BAP18Q8IXM2 172 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 LSMEM1Q8N8F7 131 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 ASH2LQ9UBL3 628 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 C7orf66A4D0T2 115 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 PHF1O43189 567 aaPredicted RBP11.04□□□□□ -0.64
COLCA1-201ENST00000355430 NME2P1O60361 137 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 OR7C1O76099 320 aaPredicted RBP11.04□□□□□ -0.64
COLCA1-201ENST00000355430 ZNF136P52737 540 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 EIF2S3LQ2VIR3 472 aaKnown RBP11.04□□□□□ -0.64
COLCA1-201ENST00000355430 SLC23A3Q6PIS1 610 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 ANKRD37Q7Z713 158 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 OR5M9Q8NGP3 310 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 OR2V1Q8NHB1 315 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 GPR84Q9NQS5 396 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 TRIOBPQ9H2D6 2365 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 IGKV1-8A0A0C4DH67 115 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 IGHV5-10-1A0A0J9YXX1 117 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 CCL4P13236 92 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 CD80P33681 288 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 UBE2KP61086 200 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 DOK3Q7L591 496 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 COMTD1Q86VU5 262 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 NPEPL1Q8NDH3 523 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 CMBLQ96DG6 245 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 NTMQ9P121 344 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 RAB5CP51148 216 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 GRB2P62993 217 aaKnown RBP11.04□□□□□ -0.64
COLCA1-201ENST00000355430 OR2W3Q7Z3T1 314 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 RNF128Q8TEB7 428 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 CPNE4Q96A23 557 aaPredicted RBP11.04□□□□□ -0.64
COLCA1-201ENST00000355430 TRAF4Q9BUZ4 470 aaPredicted RBP11.04□□□□□ -0.64
COLCA1-201ENST00000355430 CA10Q9NS85 328 aa11.04□□□□□ -0.64
COLCA1-201ENST00000355430 HSPB6O14558 160 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 OIP5O43482 229 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 NXPH3O95157 252 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 IGHV4-34P06331 123 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 OR13C7P0DN81 318 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 GABRA1P14867 456 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 ZNF117Q03924 483 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 PAN3Q58A45 887 aaKnown RBP11.03□□□□□ -0.64
COLCA1-201ENST00000355430 FAM181AQ8N9Y4 354 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 LRRC3BQ96PB8 259 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 FRRS1LQ9P0K9 344 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 OR14J1Q9UGF5 321 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms