RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 NTF4P34130 210 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 GSK3AP49840 483 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 AP2S1P53680 142 aaPredicted RBP13.57□□□□□ -0.24
UPF3B-202ENST00000345865 Q0VFX4 171 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 FOXL2NBQ6ZUU3 175 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 DTWD2Q8NBA8 298 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 OR5D18Q8NGL1 313 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 MARVELD3Q96A59 401 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 PGAM5Q96HS1 289 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 TMEM41AQ96HV5 264 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 DMRTA2Q96SC8 542 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 NUDT16L1Q9BRJ7 211 aaKnown RBP13.57□□□□□ -0.24
UPF3B-202ENST00000345865 RBM24Q9BX46 236 aaKnown RBP13.57□□□□□ -0.24
UPF3B-202ENST00000345865 IFT46Q9NQC8 304 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 FOXD3Q9UJU5 478 aaPredicted RBP13.57□□□□□ -0.24
UPF3B-202ENST00000345865 COL27A1Q8IZC6 1860 aaPredicted RBP13.57□□□□□ -0.24
UPF3B-202ENST00000345865 PCSK5Q92824 1860 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 PMS2P1A4D2B8 440 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 SHOXO15266 292 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 DHHO43323 396 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 EIF1BO60739 113 aaKnown RBP13.57□□□□□ -0.24
UPF3B-202ENST00000345865 CER1O95813 267 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 CD34P28906 385 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 FAM209AQ5JX71 171 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 CLVS2Q5SYC1 327 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 OR2W3Q7Z3T1 314 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 GJC3Q8NFK1 279 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 NPRL2Q8WTW4 380 aa13.57□□□□□ -0.24
UPF3B-202ENST00000345865 ZC3H10Q96K80 434 aaKnown RBP13.57□□□□□ -0.24
UPF3B-202ENST00000345865 NOP16Q9Y3C1 178 aaKnown RBP13.57□□□□□ -0.24
UPF3B-202ENST00000345865 POM121CA8CG34 1229 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 RP2O75695 350 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 CRYZL1O95825 349 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 CD8AP01732 235 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 NMBP08949 121 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 FOLR3P41439 243 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 SLC6A9P48067 706 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 DUSP3P51452 185 aaPredicted RBP13.56□□□□□ -0.24
UPF3B-202ENST00000345865 B3GALT5-AS1P59052 145 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 RAC1P63000 192 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 HIST1H3AP68431 136 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 UBE2V2Q15819 145 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 LPAL2Q16609 132 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 HIST2H3PS2Q5TEC6 136 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 RFPL4BQ6ZWI9 263 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 HIST2H3AQ71DI3 136 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 KCNG3Q8TAE7 436 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 ST8SIA4Q92187 359 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 RAB3CQ96E17 227 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 FBXO17Q96EF6 278 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 SEC22AQ96IW7 307 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 GPER1Q99527 375 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 TMEM59Q9BXS4 323 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 MFFQ9GZY8 342 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 B3GALNT1O75752 331 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 CBR3O75828 277 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 SCO1O75880 301 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 SCGNO76038 276 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 IL2RAP01589 272 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 CHRM2P08172 466 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 RPA2P15927 270 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 HIST1H1DP16402 221 aaKnown RBP13.56□□□□□ -0.24
UPF3B-202ENST00000345865 GMFBP60983 142 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 MICBQ29980 383 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 GSG1LQ6UXU4 331 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 LYG2Q86SG7 212 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 YRDCQ86U90 279 aaKnown RBP13.56□□□□□ -0.24
UPF3B-202ENST00000345865 BEST3Q8N1M1 668 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 ARMC10Q8N2F6 343 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 ARHGAP5-AS1Q96IT6 56 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 CXorf58Q96LI9 332 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 NARFLQ9H6Q4 476 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 ZNF224Q9NZL3 707 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 KIF25Q9UIL4 384 aa13.56□□□□□ -0.24
UPF3B-202ENST00000345865 C9orf170A2RU37 121 aa13.55□□□□□ -0.24
UPF3B-202ENST00000345865 OR5H14A6NHG9 310 aa13.55□□□□□ -0.24
UPF3B-202ENST00000345865 EFSO43281 561 aa13.55□□□□□ -0.24
UPF3B-202ENST00000345865 CRTAPO75718 401 aaPredicted RBP13.55□□□□□ -0.24
UPF3B-202ENST00000345865 SNAPC5O75971 98 aa13.55□□□□□ -0.24
UPF3B-202ENST00000345865 VAMP5O95183 116 aa13.55□□□□□ -0.24
UPF3B-202ENST00000345865 RFPL3SP0C7P2 107 aa13.55□□□□□ -0.24
UPF3B-202ENST00000345865 FAHP16930 419 aa13.55□□□□□ -0.24
UPF3B-202ENST00000345865 MPGP29372 298 aa13.55□□□□□ -0.24
UPF3B-202ENST00000345865 AVPR2P30518 371 aa13.55□□□□□ -0.24
UPF3B-202ENST00000345865 OTX1P32242 354 aaPredicted RBP13.55□□□□□ -0.24
UPF3B-202ENST00000345865 GUCA1AP43080 201 aaPredicted RBP13.55□□□□□ -0.24
UPF3B-202ENST00000345865 KISS1Q15726 138 aa13.55□□□□□ -0.24
UPF3B-202ENST00000345865 ZNF660Q6AZW8 331 aaPredicted RBP13.55□□□□□ -0.24
UPF3B-202ENST00000345865 PPP1R32Q7Z5V6 425 aa13.55□□□□□ -0.24
UPF3B-202ENST00000345865 NAXDQ8IW45 347 aa13.55□□□□□ -0.24
UPF3B-202ENST00000345865 ZDHHC22Q8N966 263 aa13.55□□□□□ -0.24
UPF3B-202ENST00000345865 OR4K15Q8NH41 348 aa13.55□□□□□ -0.24
UPF3B-202ENST00000345865 REG4Q9BYZ8 158 aa13.55□□□□□ -0.24
UPF3B-202ENST00000345865 ANAPC10Q9UM13 185 aa13.55□□□□□ -0.24
UPF3B-202ENST00000345865 PLEKHA6Q9Y2H5 1048 aa13.55□□□□□ -0.24
UPF3B-202ENST00000345865 TECTAO75443 2155 aa13.55□□□□□ -0.24
UPF3B-202ENST00000345865 TUBAL3A6NHL2 446 aa13.55□□□□□ -0.24
UPF3B-202ENST00000345865 CSNK2A1P68400 391 aaPredicted RBP13.55□□□□□ -0.24
UPF3B-202ENST00000345865 SRSF4Q08170 494 aaKnown RBP13.55□□□□□ -0.24
UPF3B-202ENST00000345865 SLC23A3Q6PIS1 610 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms