RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 SLC35A1P78382 337 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 PLAC9Q5JTB6 97 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 ACOT7LQ6ZUV0 252 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 ADAD2Q8NCV1 583 aaKnown RBP12.85□□□□□ -0.35
TDP2-201ENST00000341060 SAP25Q8TEE9 199 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 FBXW5Q969U6 566 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 RAB3CQ96E17 227 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 TMEM41AQ96HV5 264 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 FAM71F1Q96KD3 344 aaPredicted RBP12.85□□□□□ -0.35
TDP2-201ENST00000341060 VRK1Q99986 396 aaPredicted RBP12.85□□□□□ -0.35
TDP2-201ENST00000341060 TMEM59Q9BXS4 323 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 RASL12Q9NYN1 266 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 TTC28Q96AY4 2481 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 A0A1B0GW55 424 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 D6RAR5 112 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 BET1O15155 118 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 PMP2P02689 132 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 DUX4L2P0CJ85 424 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 DUX4L3P0CJ86 424 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 DUX4L4P0CJ87 422 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 DUX4L5P0CJ88 424 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 DUX4L6P0CJ89 424 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 DUX4L7P0CJ90 424 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 NR2C1P13056 603 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 AKR1C4P17516 323 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 KLK2P20151 261 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 VAMP1P23763 118 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 AVPR2P30518 371 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 TAS2R31P59538 309 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 FAM189A2Q15884 450 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 MICBQ29980 383 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 SMUG1Q53HV7 270 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 PRAMEF20Q5VT98 475 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 ZNF283Q8N7M2 679 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 SPERTQ8NA61 448 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 RELL2Q8NC24 303 aaPredicted RBP12.84□□□□□ -0.35
TDP2-201ENST00000341060 PXT1Q8NFP0 134 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 OR2I1PQ8NGU4 316 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 PHYHIPLQ96FC7 376 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 WDR54Q9H977 334 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 AKIRIN1Q9H9L7 192 aaPredicted RBP12.84□□□□□ -0.35
TDP2-201ENST00000341060 DUX4Q9UBX2 424 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 GPR160Q9UJ42 338 aa12.84□□□□□ -0.35
TDP2-201ENST00000341060 TECTAO75443 2155 aa12.83□□□□□ -0.35
TDP2-201ENST00000341060 CEACAM18A8MTB9 384 aa12.83□□□□□ -0.35
TDP2-201ENST00000341060 TEX46H3BTG2 121 aa12.83□□□□□ -0.35
TDP2-201ENST00000341060 SOCS1O15524 211 aa12.83□□□□□ -0.35
TDP2-201ENST00000341060 TLX3O43711 291 aaPredicted RBP12.83□□□□□ -0.35
TDP2-201ENST00000341060 CTSSP25774 331 aa12.83□□□□□ -0.35
TDP2-201ENST00000341060 DLSTP36957 453 aa12.83□□□□□ -0.35
TDP2-201ENST00000341060 LSM6P62312 80 aaKnown RBP12.83□□□□□ -0.35
TDP2-201ENST00000341060 H3F3AP84243 136 aa12.83□□□□□ -0.35
TDP2-201ENST00000341060 PCOLCEQ15113 449 aa12.83□□□□□ -0.35
TDP2-201ENST00000341060 ACTBL2Q562R1 376 aa12.83□□□□□ -0.35
TDP2-201ENST00000341060 VAX1Q5SQQ9 334 aa12.83□□□□□ -0.35
TDP2-201ENST00000341060 LYSMD4Q5XG99 296 aa12.83□□□□□ -0.35
TDP2-201ENST00000341060 TMPPEQ6ZT21 453 aa12.83□□□□□ -0.35
TDP2-201ENST00000341060 FAM57BQ71RH2 274 aa12.83□□□□□ -0.35
TDP2-201ENST00000341060 ARRDC1Q8N5I2 433 aa12.83□□□□□ -0.35
TDP2-201ENST00000341060 TERB2Q8NHR7 220 aa12.83□□□□□ -0.35
TDP2-201ENST00000341060 MARCH1Q8TCQ1 289 aa12.83□□□□□ -0.35
TDP2-201ENST00000341060 CASTOR1Q8WTX7 329 aa12.83□□□□□ -0.35
TDP2-201ENST00000341060 ZNF416Q9BWM5 594 aa12.83□□□□□ -0.35
TDP2-201ENST00000341060 LOC102723996A0A087X1L8 192 aa12.83□□□□□ -0.36
TDP2-201ENST00000341060 IGKV1-9A0A0C4DH69 117 aa12.83□□□□□ -0.36
TDP2-201ENST00000341060 FAM25EA8MYX2 175 aa12.83□□□□□ -0.36
TDP2-201ENST00000341060 LGALS8O00214 317 aa12.83□□□□□ -0.36
TDP2-201ENST00000341060 IGLV3-1P01715 115 aa12.83□□□□□ -0.36
TDP2-201ENST00000341060 HOXD11P31277 338 aaPredicted RBP12.83□□□□□ -0.36
TDP2-201ENST00000341060 LUMP51884 338 aaPredicted RBP12.83□□□□□ -0.36
TDP2-201ENST00000341060 TMEM50BP56557 158 aa12.83□□□□□ -0.36
TDP2-201ENST00000341060 CLDN17P56750 224 aa12.83□□□□□ -0.36
TDP2-201ENST00000341060 SIGLEC14Q08ET2 396 aa12.83□□□□□ -0.36
TDP2-201ENST00000341060 EIF3IQ13347 325 aaKnown RBP12.83□□□□□ -0.36
TDP2-201ENST00000341060 PNLIPRP3Q17RR3 467 aa12.83□□□□□ -0.36
TDP2-201ENST00000341060 GFOD2Q3B7J2 385 aa12.83□□□□□ -0.36
TDP2-201ENST00000341060 GTPBP8Q8N3Z3 284 aaPredicted RBP12.83□□□□□ -0.36
TDP2-201ENST00000341060 OR56B1Q8NGI3 324 aa12.83□□□□□ -0.36
TDP2-201ENST00000341060 OR10K1Q8NGX5 313 aa12.83□□□□□ -0.36
TDP2-201ENST00000341060 OR14K1Q8NGZ2 314 aa12.83□□□□□ -0.36
TDP2-201ENST00000341060 THAP6Q8TBB0 222 aa12.83□□□□□ -0.36
TDP2-201ENST00000341060 DNTTIP1Q9H147 329 aa12.83□□□□□ -0.36
TDP2-201ENST00000341060 BANF2Q9H503 90 aa12.83□□□□□ -0.36
TDP2-201ENST00000341060 OCIAD1Q9NX40 245 aa12.83□□□□□ -0.36
TDP2-201ENST00000341060 RTTNQ86VV8 2226 aa12.82□□□□□ -0.36
TDP2-201ENST00000341060 A0A087WZY1 265 aa12.82□□□□□ -0.36
TDP2-201ENST00000341060 A0A1W2PP11 408 aa12.82□□□□□ -0.36
TDP2-201ENST00000341060 MFNGO00587 321 aa12.82□□□□□ -0.36
TDP2-201ENST00000341060 DHPSP49366 369 aaPredicted RBP12.82□□□□□ -0.36
TDP2-201ENST00000341060 TMEM128Q5BJH2 165 aa12.82□□□□□ -0.36
TDP2-201ENST00000341060 MOB3CQ70IA8 216 aa12.82□□□□□ -0.36
TDP2-201ENST00000341060 GPER1Q99527 375 aa12.82□□□□□ -0.36
TDP2-201ENST00000341060 OCSTAMPQ9BR26 566 aa12.82□□□□□ -0.36
TDP2-201ENST00000341060 URM1Q9BTM9 101 aaKnown RBP12.82□□□□□ -0.36
TDP2-201ENST00000341060 NELFAQ9H3P2 528 aa12.82□□□□□ -0.36
TDP2-201ENST00000341060 BARX1Q9HBU1 254 aaPredicted RBP12.82□□□□□ -0.36
TDP2-201ENST00000341060 GLS2Q9UI32 602 aa12.82□□□□□ -0.36
TDP2-201ENST00000341060 NXT1Q9UKK6 140 aaKnown RBP12.82□□□□□ -0.36
TDP2-201ENST00000341060 E9PLN8 166 aa12.82□□□□□ -0.36
TDP2-201ENST00000341060 CRTAPO75718 401 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms