RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 RFPL4BQ6ZWI9 263 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 FJX1Q86VR8 437 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 MFSD4AQ8N468 514 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 STEAP2Q8NFT2 490 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 OR5H6Q8NGV6 325 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 TRMT10AQ8TBZ6 339 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 MUCL1Q96DR8 90 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 PLGRKTQ9HBL7 147 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 HMG20AQ9NP66 347 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 TBCCD1Q9NVR7 557 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ABRACLQ9P1F3 81 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 CGGBP1Q9UFW8 167 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 HEATR1Q9H583 2144 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 DHRS7CA6NNS2 312 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 SULT1B1O43704 296 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 IGLV1-44P01699 117 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 CECR9P0C854 216 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 HLXQ14774 488 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 TAB1Q15750 504 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 DMRTC1Q5HYR2 192 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 CCDC190Q86UF4 302 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 DRAXINQ8NBI3 349 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ZNF671Q8TAW3 534 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 C10orf35Q96D05 121 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 LIN7BQ9HAP6 207 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 TMEM138Q9NPI0 162 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 EIF3KQ9UBQ5 218 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 IGHV1-18A0A0C4DH31 117 aa12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 C16orf97H3BN30 126 aa12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 J3QRK9 145 aa12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 FAM157BP0CG42 384 aa12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 CCKARP32238 428 aa12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ZNF83P51522 516 aa12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ZNF846Q147U1 533 aa12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 PPA1Q15181 289 aa12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 OR8B8Q15620 311 aa12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 MRPL21Q7Z2W9 205 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 OR5AS1Q8N127 324 aa12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 JAGN1Q8N5M9 183 aa12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 NKAIN3Q8N8D7 197 aa12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 SAMD12Q8N8I0 201 aa12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 OR52N4Q8NGI2 321 aa12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 PP6455Q8WZ26 134 aa12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 WDFY2Q96P53 400 aa12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 REPIN1Q9BWE0 567 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 WDR12Q9GZL7 423 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 CHST5Q9GZS9 411 aa12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 STEAP1Q9UHE8 339 aa12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 USP24Q9UPU5 2620 aa12.73□□□□□ -0.37
CDK5RAP3-201ENST00000338399 IGKV1-9A0A0C4DH69 117 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 SLC17A2O00624 439 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 SMPD2O60906 423 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 P2RY14Q15391 338 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 UBE2V2Q15819 145 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 SPANXN2Q5MJ10 180 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 C22orf34Q6ZV56 151 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 FAM169BQ8N8A8 192 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 OR5L1Q8NGL2 311 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 LGALS14Q8TCE9 139 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 CCDC120Q96HB5 630 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 DIRAS2Q96HU8 199 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 SPACA5Q96QH8 159 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 GPR173Q9NS66 373 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 FAM25AB3EWG3 89 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 FAM25CB3EWG5 89 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 FAM25GB3EWG6 89 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ATXN7O15265 892 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ERCC1P07992 297 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 OCMP0CE72 109 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 CD37P11049 281 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ZNF35P13682 527 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ELK1P19419 428 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ETV6P41212 452 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ADORA2A-AS1P86434 159 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 SPATA46Q5T0L3 261 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 UTS2BQ765I0 119 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 RNF144BQ7Z419 303 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 NPRL2Q8WTW4 380 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 NPAP1Q9NZP6 1156 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 SPATA2Q9UM82 520 aa12.72□□□□□ -0.37
CDK5RAP3-201ENST00000338399 NBASA2RRP1 2371 aa12.71□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ESPL1Q14674 2120 aa12.71□□□□□ -0.37
CDK5RAP3-201ENST00000338399 GGT3PA6NGU5 568 aa12.71□□□□□ -0.37
CDK5RAP3-201ENST00000338399 M0R1B8 84 aa12.71□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ICMTO60725 284 aa12.71□□□□□ -0.37
CDK5RAP3-201ENST00000338399 TMEM127O75204 238 aa12.71□□□□□ -0.37
CDK5RAP3-201ENST00000338399 EIF4EP06730 217 aaKnown RBP12.71□□□□□ -0.37
CDK5RAP3-201ENST00000338399 HCKP08631 526 aa12.71□□□□□ -0.37
CDK5RAP3-201ENST00000338399 CALCBP10092 127 aa12.71□□□□□ -0.37
CDK5RAP3-201ENST00000338399 HTR2CP28335 458 aa12.71□□□□□ -0.37
CDK5RAP3-201ENST00000338399 UCP2P55851 309 aa12.71□□□□□ -0.37
CDK5RAP3-201ENST00000338399 PPP1CBP62140 327 aa12.71□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ZNF45Q02386 682 aa12.71□□□□□ -0.37
CDK5RAP3-201ENST00000338399 MADCAM1Q13477 382 aa12.71□□□□□ -0.37
CDK5RAP3-201ENST00000338399 RAB11BQ15907 218 aa12.71□□□□□ -0.37
CDK5RAP3-201ENST00000338399 FAM166AQ6J272 317 aa12.71□□□□□ -0.37
CDK5RAP3-201ENST00000338399 LYPD6Q86Y78 171 aa12.71□□□□□ -0.37
CDK5RAP3-201ENST00000338399 OR56B2PQ8NGI1 322 aa12.71□□□□□ -0.37
CDK5RAP3-201ENST00000338399 FOXRED1Q96CU9 486 aaPredicted RBP12.71□□□□□ -0.37
CDK5RAP3-201ENST00000338399 PPP1R3EQ9H7J1 279 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms