RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 GPR84Q9NQS5 396 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 UBAP1Q9NZ09 502 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 MRPL15Q9P015 296 aaKnown RBP10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 FRRS1LQ9P0K9 344 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 ERVK-18Q9QC07 812 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 SLC22A13Q9Y226 551 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 TRBV2A0A0J9YWF9 115 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 hCG_38984A0A1B0GV85 526 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 LOC390937A0A1W2PQ73 354 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 ZSCAN5BA6NJL1 495 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 P2RY10O00398 339 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 SYT7O43581 403 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 GMDSO60547 372 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 IGHV1-46P01743 117 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 ADH4P08319 380 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 UBCP0CG48 685 aaKnown RBP10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 GNALP38405 381 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 ART1P52961 327 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 MZT1Q08AG7 82 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 WDR38Q5JTN6 314 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 OR2G6Q5TZ20 316 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 SHEQ5VZ18 495 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 PRSS57Q6UWY2 283 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 KLBQ86Z14 1044 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 PRSS35Q8N3Z0 413 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 ZNF676Q8N7Q3 588 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 SEMA6DQ8NFY4 1073 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 OR56B2PQ8NGI1 322 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 LYZL4Q96KX0 146 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 SORCS2Q96PQ0 1159 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 HIST1H2AAQ96QV6 131 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 MND1Q9BWT6 205 aa10.15□□□□□ -0.78
SPTLC1-202ENST00000337841 SPG11Q96JI7 2443 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 A0A1B0GTI1 187 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 E9PI62 339 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 SSX4O60224 188 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 MRPS14O60783 128 aaKnown RBP10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 NDUFS7O75251 213 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 DHRS3O75911 302 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 CST4P01036 141 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 IGLV3-1P01715 115 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 IGHV4-39P01824 125 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 ISG15P05161 165 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 TNFRSF1AP19438 455 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 CA6P23280 308 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 ANOS1P23352 680 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 SRP9P49458 86 aaKnown RBP10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 WNT4P56705 351 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 DSCR9P59020 149 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 TAS2R43P59537 309 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 CCL8P80075 99 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 TNFAIP6P98066 277 aaPredicted RBP10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 OR8G1Q15617 311 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 OR8B8Q15620 311 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 ODF4Q2M2E3 257 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 TMEM255AQ5JRV8 349 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 ZBTB37Q5TC79 503 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 Q6ZR03 302 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 PRSS48Q7RTY5 328 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 PLPP7Q8NBV4 271 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 OR5AK2Q8NH90 309 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 UBASH3BQ8TF42 649 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 PIGCQ92535 297 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 RDH5Q92781 318 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 ELMOD3Q96FG2 381 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 COMMD4Q9H0A8 199 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 ABCB9Q9NP78 766 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 MYOZ1Q9NP98 299 aaPredicted RBP10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 TRIM36Q9NQ86 728 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 IL19Q9UHD0 177 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 ENPP5Q9UJA9 477 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 MPC1Q9Y5U8 109 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 CRYBG3Q68DQ2 2970 aa10.14□□□□□ -0.79
SPTLC1-202ENST00000337841 ABCA12Q86UK0 2595 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 ZNF816-ZNF321PA0A0X1KG74 233 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 TMEM212A6NML5 194 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 ANXA2P2A6NMY6 339 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 OR4C45A6NMZ5 311 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 OGG1O15527 345 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 SERPINA3P01011 423 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 CD55P08174 381 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 DAOP14920 347 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 CCL1P22362 96 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 MAGEB1P43366 347 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 KIR3DL2P43630 455 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 GTF2A1P52655 376 aaPredicted RBP10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 CDH15P55291 814 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 NANOS3P60323 173 aaKnown RBP10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 GABARAPL2P60520 117 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 MRPS11P82912 194 aaKnown RBP10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 SPHARQ15513 63 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 RDH10Q8IZV5 341 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 OR8S1Q8NH09 359 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 GTF3AQ92664 365 aaKnown RBP10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 PAPOLGQ9BWT3 736 aaKnown RBP10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 CXXC4Q9H2H0 198 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 DLL4Q9NR61 685 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 C14orf119Q9NWQ9 140 aa10.13□□□□□ -0.79
SPTLC1-202ENST00000337841 PAK1IP1Q9NWT1 392 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms