RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 OR5L1Q8NGL2 311 aa7.34□□□□□ -1.24
HPS4-201ENST00000336873 BORCS8Q96FH0 119 aa7.34□□□□□ -1.24
HPS4-201ENST00000336873 MFRPQ9BY79 579 aa7.34□□□□□ -1.24
HPS4-201ENST00000336873 CALHM2Q9HA72 323 aa7.34□□□□□ -1.24
HPS4-201ENST00000336873 LRRK1Q38SD2 2015 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 OBSL1O75147 1896 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 RD3LP0DJH9 198 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 SULT1A3P0DMM9 295 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 SULT1A4P0DMN0 295 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 SRFP11831 508 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 GDF1P27539 372 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 RIN1Q13671 783 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 IAH1Q2TAA2 248 aaPredicted RBP7.33□□□□□ -1.24
HPS4-201ENST00000336873 TRIM61Q5EBN2 209 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 ANKRD16Q6P6B7 361 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 GPR137CQ8N3F9 429 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 IL22RA1Q8N6P7 574 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 SGK3Q96BR1 496 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 UBL7Q96S82 380 aaPredicted RBP7.33□□□□□ -1.24
HPS4-201ENST00000336873 PRRT1Q99946 306 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 CHST11Q9NPF2 352 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 WNT16Q9UBV4 365 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 DOPEY2Q9Y3R5 2298 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 FRG2CA6NGY1 282 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 PLPP3O14495 311 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 NAGAP17050 411 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 LTC4SQ16873 150 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 TMEM71Q6P5X7 295 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 BEND4Q6ZU67 534 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 TRILQ7L0X0 811 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 CDC20BQ86Y33 519 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 SPAG16Q8N0X2 631 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 STPG2Q8N412 459 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 SLC25A45Q8N413 288 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 SLC22A24Q8N4F4 322 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 SMRP1Q8NCR6 262 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 PXT1Q8NFP0 134 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 LHFPL5Q8TAF8 219 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 SECTM1Q8WVN6 248 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 ASB17Q8WXJ9 295 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 SEH1LQ96EE3 360 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 GFI1Q99684 422 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 LDAHQ9H6V9 325 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 C12orf49Q9H741 205 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.33□□□□□ -1.24
HPS4-201ENST00000336873 HAO2Q9NYQ3 351 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 C19orf25Q9UFG5 118 aaPredicted RBP7.33□□□□□ -1.24
HPS4-201ENST00000336873 OPN4Q9UHM6 478 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 GPR160Q9UJ42 338 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 CREBBPQ92793 2442 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 MED6O75586 246 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 EIF3GO75821 320 aaKnown RBP eCLIP7.33□□□□□ -1.24
HPS4-201ENST00000336873 P04436 131 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 SNRNP70P08621 437 aaKnown RBP7.33□□□□□ -1.24
HPS4-201ENST00000336873 ASAH2BP0C7U1 165 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 GLB1P16278 677 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 CSF2RBP32927 897 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 MRPS10P82664 201 aaKnown RBP7.33□□□□□ -1.24
HPS4-201ENST00000336873 ACSM1Q08AH1 577 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 SHEQ5VZ18 495 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 MOB3CQ70IA8 216 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 SYT13Q7L8C5 426 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 MRGPREQ86SM8 312 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 CCDC36Q8IYA8 594 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 STOML3Q8TAV4 291 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 ZNF721Q8TF20 911 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 TCEAL3Q969E4 200 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 ZNF764Q96H86 408 aaPredicted RBP7.33□□□□□ -1.24
HPS4-201ENST00000336873 MAGT1Q9H0U3 335 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 PRDM6Q9NQX0 595 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 ICAM5Q9UMF0 924 aa7.33□□□□□ -1.24
HPS4-201ENST00000336873 ALG1L2C9J202 215 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 H3BP45 60 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 EFSO43281 561 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 LAMTOR5O43504 91 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 CXCL13O43927 109 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 SCGNO76038 276 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 ATG12O94817 140 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 DDAH2O95865 285 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 GIPP09681 153 aaPredicted RBP7.32□□□□□ -1.24
HPS4-201ENST00000336873 HERV-K104P61576 105 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 RIPPLY1Q0D2K3 151 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 TCEAL6Q6IPX3 200 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 SULF2Q8IWU5 870 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 LINC00518Q8N0U6 118 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 NANPQ8TBE9 248 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 RNF128Q8TEB7 428 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 ZC3HAV1LQ96H79 300 aaKnown RBP7.32□□□□□ -1.24
HPS4-201ENST00000336873 SLC5A7Q9GZV3 580 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 MTCH2Q9Y6C9 303 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 R4GMQ9 66 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 KIAA1549LQ6ZVL6 1849 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 A6NIZ1 184 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 C3orf80F5H4A9 247 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 AGTR1P30556 359 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 RGS19P49795 217 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 PNLIPRP2P54317 469 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 RAP1BP61224 184 aa7.32□□□□□ -1.24
HPS4-201ENST00000336873 RPS16P62249 146 aaKnown RBP7.32□□□□□ -1.24
HPS4-201ENST00000336873 RAP1AP62834 184 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms