RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 FBXW11Q9UKB1 542 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 PADI3Q9ULW8 664 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 KCNE1BA0A087WTH5 132 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 A0A1B0GU03 582 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 CTSDP07339 412 aaPredicted RBP7.7□□□□□ -1.18
TDP1-201ENST00000335725 STC1P52823 247 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 DECR1Q16698 335 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 TMEM176BQ3YBM2 270 aaPredicted RBP7.7□□□□□ -1.18
TDP1-201ENST00000335725 KLHDC8AQ8IYD2 350 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 TMEM229BQ8NBD8 167 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 OR51A2Q8NGJ7 313 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 ZNF417Q8TAU3 575 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 ZNF519Q8TB69 540 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 SLAMF6Q96DU3 332 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 DERL3Q96Q80 235 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 TMEM140Q9NV12 185 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 PLEKHJ1Q9NW61 149 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 FBXO4Q9UKT5 387 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 V9GY05 133 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 A0A1B0GW15 77 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 ANTXRLA6NF34 631 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 RBFOX3A6NFN3 312 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 E5RGE8 158 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 TRAPPC6AO75865 159 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 CD3DP04234 171 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 NTSP30990 170 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 TDRG1Q3Y452 100 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 TCTEX1D4Q5JR98 221 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 CLEC10AQ8IUN9 316 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 C20orf196Q8IYI0 205 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 CLECL1Q8IZS7 167 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 OR5B3Q8NH48 314 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 GABRG3Q99928 467 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 NUDT9Q9BW91 350 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 NOX4Q9NPH5 578 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 OR51B2Q9Y5P1 312 aa7.7□□□□□ -1.18
TDP1-201ENST00000335725 C1orf226A1L170 272 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 FFAR1O14842 300 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 PQBP1O60828 265 aaKnown RBP7.69□□□□□ -1.18
TDP1-201ENST00000335725 F11P03951 625 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 AMY2AP04746 511 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 NID1P14543 1247 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 ACVR1BP36896 505 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 PRLHRP49683 370 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 TPPP2P59282 170 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 PLAC9Q5JTB6 97 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 KIAA0895LQ68EN5 471 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 DMKNQ6E0U4 476 aaPredicted RBP7.69□□□□□ -1.18
TDP1-201ENST00000335725 ZNF709Q8N972 641 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 OR8G5Q8NG78 346 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 ASB10Q8WXI3 467 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 OR6C1Q96RD1 312 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 TMEM134Q9H6X4 195 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 METTL7AQ9H8H3 244 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 SLC2A4RGQ9NR83 387 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 PPIAL4AQ9Y536 164 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 SHROOM3Q8TF72 1996 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 A0A1W2PS29 197 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 OR4C45A6NMZ5 311 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 TRAF3IP2O43734 574 aaPredicted RBP7.69□□□□□ -1.18
TDP1-201ENST00000335725 GPR37L1O60883 481 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 HSPB1P04792 205 aaKnown RBP7.69□□□□□ -1.18
TDP1-201ENST00000335725 PPIAL4GP0DN37 164 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 GABRA3P34903 492 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 TIMP3P35625 211 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 CYB561P49447 251 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 LIM2P55344 173 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 RPS8P62241 208 aaKnown RBP7.69□□□□□ -1.18
TDP1-201ENST00000335725 ADIPOQQ15848 244 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 TMEM249Q2WGJ8 235 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 METTL27Q8N6F8 245 aaPredicted RBP7.69□□□□□ -1.18
TDP1-201ENST00000335725 ZDHHC22Q8N966 263 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 OR4L1Q8NH43 312 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 SUN3Q8TAQ9 357 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 KTI12Q96EK9 354 aaPredicted RBP7.69□□□□□ -1.18
TDP1-201ENST00000335725 CITED1Q99966 193 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 CITED2Q99967 270 aaPredicted RBP7.69□□□□□ -1.18
TDP1-201ENST00000335725 CENPMQ9NSP4 180 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 ZNF107Q9UII5 783 aaPredicted RBP7.69□□□□□ -1.18
TDP1-201ENST00000335725 MAP1LC3B2A6NCE7 125 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 NKX2-6A6NCS4 301 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 GJB3O75712 270 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 KLF8O95600 359 aaPredicted RBP7.69□□□□□ -1.18
TDP1-201ENST00000335725 CNN1P51911 297 aaKnown RBP7.69□□□□□ -1.18
TDP1-201ENST00000335725 HERV-K104P63124 156 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 SNRPNP63162 240 aaKnown RBP7.69□□□□□ -1.18
TDP1-201ENST00000335725 JAG1P78504 1218 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 PIN1Q13526 163 aaPredicted RBP7.69□□□□□ -1.18
TDP1-201ENST00000335725 CCSMST1Q4G0I0 132 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 LRRC10Q5BKY1 277 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 CPTPQ5TA50 214 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 MBOAT2Q6ZWT7 520 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 CMTM8Q8IZV2 173 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 DEFB106AQ8N104 65 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 OR1N2Q8NGR9 330 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 OR8S1Q8NH09 359 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 SLC35G5Q96KT7 338 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 MAP1LC3BQ9GZQ8 125 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 TMEM39BQ9GZU3 492 aa7.69□□□□□ -1.18
TDP1-201ENST00000335725 MTHFD2LQ9H903 347 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms