RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 FZR1Q9UM11 496 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 GPR179Q6PRD1 2367 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 A0A1W2PQM1 296 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 LRP5LA4QPB2 252 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 MED6O75586 246 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 ERGP11308 486 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 DGCR2P98153 550 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 TUSC5Q8IXB3 177 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 CMTM4Q8IZR5 234 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 OR6X1Q8NH79 312 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 TECTBQ96PL2 329 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 ZNF2Q9BSG1 426 aaPredicted RBP13.41□□□□□ -0.26
C9orf47-201ENST00000334490 ADAT1Q9BUB4 502 aaKnown RBP13.41□□□□□ -0.26
C9orf47-201ENST00000334490 ZNF318Q5VUA4 2279 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 LIPT2A6NK58 231 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 SP1P08047 785 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 DEFA4P12838 97 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 GNB3P16520 340 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 EIF2S3LQ2VIR3 472 aaKnown RBP13.4□□□□□ -0.26
C9orf47-201ENST00000334490 ADGRG3Q86Y34 549 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 CRIPAKQ8N1N5 446 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 FAM210AQ96ND0 272 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 FGF5P12034 268 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 CCL2P13500 99 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 DUSP1P28562 367 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 WDR38Q5JTN6 314 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 SLAMF9Q96A28 289 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 DERL3Q96Q80 235 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 KCNJ16Q9NPI9 418 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 GLRX2Q9NS18 164 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 TRBV5-3A0A0A0MS03 114 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 LGALS8O00214 317 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 TERTO14746 1132 aaKnown RBP13.4□□□□□ -0.26
C9orf47-201ENST00000334490 PTBP1P26599 531 aaKnown RBP eCLIP13.4□□□□□ -0.26
C9orf47-201ENST00000334490 GPR12P47775 334 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 LUMP51884 338 aaPredicted RBP13.4□□□□□ -0.26
C9orf47-201ENST00000334490 RRAS2P62070 204 aaPredicted RBP13.4□□□□□ -0.26
C9orf47-201ENST00000334490 ZNF767PQ75MW2 155 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 LSMEM1Q8N8F7 131 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 HAS2Q92819 552 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 PELI1Q96FA3 418 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 S1PR3Q99500 378 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 SHARPINQ9H0F6 387 aa13.4□□□□□ -0.26
C9orf47-201ENST00000334490 TIMM8BQ9Y5J9 83 aaPredicted RBP13.4□□□□□ -0.26
C9orf47-201ENST00000334490 LNP1A1A4G5 178 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 PMS2P2O95744 297 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 HBG1P69891 147 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 HBG2P69892 147 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 SKP2Q13309 424 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 DEGS2Q6QHC5 323 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 CD300LDQ6UXZ3 194 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 TSEN54Q7Z6J9 526 aaKnown RBP13.39□□□□□ -0.27
C9orf47-201ENST00000334490 SLC35G3Q8N808 338 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 OR6K3Q8NGY3 331 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 OR13G1Q8NGZ3 307 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 H3BMH7 237 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 MPZL1O95297 269 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 CD96P40200 585 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 RAB11AP62491 216 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 PRAMEF5Q5TYX0 476 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 PRAMEF6Q5VXH4 476 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 WDSUB1Q8N9V3 476 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 SLC7A6Q92536 515 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 SEC22CQ9BRL7 303 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 C20orf85Q9H1P6 137 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 FN3KRPQ9HA64 309 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 FAM96BQ9Y3D0 163 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 MRPS18BQ9Y676 258 aaKnown RBP13.39□□□□□ -0.27
C9orf47-201ENST00000334490 RBBP6Q7Z6E9 1792 aaKnown RBP13.39□□□□□ -0.27
C9orf47-201ENST00000334490 CDC14BO60729 498 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 NXPH3O95157 252 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 CA6P23280 308 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 BLOC1S1P78537 153 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 ATPAF1Q5TC12 328 aaPredicted RBP13.39□□□□□ -0.27
C9orf47-201ENST00000334490 H2BFWTQ7Z2G1 175 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 OR2AK2Q8NG84 335 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 OR4D11Q8NGI4 311 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 OR8D4Q8NGM9 314 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 SPSB1Q96BD6 273 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 VWCEQ96DN2 955 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 DOK1Q99704 481 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 DDA1Q9BW61 102 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 SF3B5Q9BWJ5 86 aaKnown RBP13.39□□□□□ -0.27
C9orf47-201ENST00000334490 ESRP2Q9H6T0 727 aaKnown RBP13.39□□□□□ -0.27
C9orf47-201ENST00000334490 TPPPO94811 219 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 CELA2AP08217 269 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 LIFP15018 202 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 ETFDHQ16134 617 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 OR2B11Q5JQS5 317 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 OR2M3Q8NG83 312 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 ITPKCQ96DU7 683 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 FCRL1Q96LA6 429 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 RANGRFQ9HD47 186 aaPredicted RBP13.39□□□□□ -0.27
C9orf47-201ENST00000334490 PPP1R3CQ9UQK1 317 aa13.39□□□□□ -0.27
C9orf47-201ENST00000334490 PLA2G7Q13093 441 aa13.38□□□□□ -0.27
C9orf47-201ENST00000334490 CCDC71Q8IV32 467 aaPredicted RBP13.38□□□□□ -0.27
C9orf47-201ENST00000334490 GABRG1Q8N1C3 465 aa13.38□□□□□ -0.27
C9orf47-201ENST00000334490 C4orf45Q96LM5 186 aa13.38□□□□□ -0.27
C9orf47-201ENST00000334490 MN1Q10571 1320 aaPredicted RBP13.38□□□□□ -0.27
C9orf47-201ENST00000334490 CYC1P08574 325 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms