RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 ME2P23368 584 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 PIK3R1P27986 724 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 PDHA2P29803 388 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SRIP30626 198 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 FGF9P31371 208 aaPredicted RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SPRP35270 261 aaPredicted RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 NUP62P37198 522 aaPredicted RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 NEK2P51955 445 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 KLF10Q13118 480 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 PMS2P3Q13401 168 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 OR8B8Q15620 311 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 PDK4Q16654 411 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 C15orf59Q2T9L4 293 aaPredicted RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SLC36A3Q495N2 470 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 IQCCQ4KMZ1 466 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 AKIRIN2Q53H80 203 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SYT14P1Q58G82 188 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 RUNDC3AQ59EK9 446 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 DCST2Q5T1A1 773 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 LGSNQ5TDP6 509 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 FAM69BQ5VUD6 431 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SFRP4Q6FHJ7 346 aaPredicted RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 WBP2NLQ6ICG8 309 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 TMEM154Q6P9G4 183 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ASCL4Q6XD76 172 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 WDR88Q6ZMY6 472 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 Q6ZRM9 215 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 KCTD8Q6ZWB6 473 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SPATA19Q7Z5L4 167 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 AMIGO2Q86SJ2 522 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 RYBPQ8N488 228 aaPredicted RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ARIH2OSQ8N7S6 290 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 OR8J2Q8NGG1 315 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 PPP1R35Q8TAP8 253 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 CERS2Q96G23 380 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 OPALINQ96PE5 141 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SDF2Q99470 211 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 NAPGQ99747 312 aaPredicted RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SPAG8Q99932 426 aaPredicted RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 TMEM79Q9BSE2 394 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 HDHD2Q9H0R4 259 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ABCG5Q9H222 651 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 DHX35Q9H5Z1 703 aaKnown RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 MOB1AQ9H8S9 216 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 FGF20Q9NP95 211 aaPredicted RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 C8orf4Q9NR00 106 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 FBXO6Q9NRD1 293 aaPredicted RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 IFNKQ9P0W0 207 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 RNF7Q9UBF6 113 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 DCDC2Q9UHG0 476 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 VAX2Q9UIW0 290 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SLC13A4Q9UKG4 626 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 NEBP20929 6669 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 TRAV36DV7A0A075B6V5 113 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 IGHV3OR16-8A0A075B7F1 116 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 A0A096LPE4 126 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 A0A1W2PPZ6 126 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 TLDC2A0PJX2 215 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 OR2T8A6NH00 312 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 OR5B21A6NL26 309 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 E9PBE3 544 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 HRKO00198 91 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 RNASET2O00584 256 aaKnown RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 XRCC2O43543 280 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 CA11O75493 328 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 GMNNO75496 209 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 PIAS1O75925 651 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SUPT7LO94864 414 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 OR8G3PP0DMU2 310 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 HIST1H1BP16401 226 aaKnown RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 EFNA1P20827 205 aaPredicted RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 IMPDH1P20839 514 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 AKT1P31749 480 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 MPIP34949 423 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 CPOXP36551 454 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 CAPZA2P47755 286 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF81P51508 661 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 TPD52P55327 224 aaPredicted RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ID3Q02535 119 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 RBBP4Q09028 425 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 NME3Q13232 169 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 CRMP1Q14194 572 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 GGTLC2Q14390 218 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 KPNB1Q14974 876 aaKnown RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 HEPACAMQ14CZ8 416 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SGCBQ16585 318 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 PNLIPRP3Q17RR3 467 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ACOT6Q3I5F7 207 aaPredicted RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 LIN52Q52LA3 116 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 THEM4Q5T1C6 240 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 CCNYL2Q5T2Q4 361 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 OR4A47Q6IF82 309 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 GJB7Q6PEY0 223 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 DEGS2Q6QHC5 323 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 IL20RBQ6UXL0 311 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 APOOLQ6UXV4 268 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 MAEAQ7L5Y9 396 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 BCDIN3DQ7Z5W3 292 aaKnown RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ISCA2Q86U28 154 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 LINC00471Q8N535 108 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms