RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PCOLCE2Q9UKZ9 415 aa14.9□□□□□ -0.02
PTCH1-201ENST00000331920 POM121BA6NF01 834 aa14.9□□□□□ -0.02
PTCH1-201ENST00000331920 ANKRD34CP0C6C1 535 aa14.9□□□□□ -0.02
PTCH1-201ENST00000331920 OR52B4Q8NGK2 314 aa14.9□□□□□ -0.02
PTCH1-201ENST00000331920 UBR1Q8IWV7 1749 aa14.9□□□□□ -0.02
PTCH1-201ENST00000331920 CCR9P51686 369 aa14.9□□□□□ -0.02
PTCH1-201ENST00000331920 LSRQ86X29 649 aaPredicted RBP14.9□□□□□ -0.02
PTCH1-201ENST00000331920 DICER1Q9UPY3 1922 aaKnown RBP14.9□□□□□ -0.02
PTCH1-201ENST00000331920 SFTA3P0C7M3 94 aa14.9□□□□□ -0.02
PTCH1-201ENST00000331920 TRMT12Q53H54 448 aaKnown RBP14.9□□□□□ -0.02
PTCH1-201ENST00000331920 GFRALQ6UXV0 394 aa14.9□□□□□ -0.02
PTCH1-201ENST00000331920 RPL27P61353 136 aaKnown RBP14.9□□□□□ -0.02
PTCH1-201ENST00000331920 OR52L2PQ8NGH6 319 aa14.9□□□□□ -0.02
PTCH1-201ENST00000331920 MARCH1Q8TCQ1 289 aa14.9□□□□□ -0.02
PTCH1-201ENST00000331920 MAP1LC3CQ9BXW4 147 aa14.9□□□□□ -0.02
PTCH1-201ENST00000331920 GLIPR2Q9H4G4 154 aa14.9□□□□□ -0.02
PTCH1-201ENST00000331920 PSORS1C1Q9UIG5 152 aa14.9□□□□□ -0.02
PTCH1-201ENST00000331920 NDRG4Q9ULP0 352 aaKnown RBP14.9□□□□□ -0.02
PTCH1-201ENST00000331920 LOC389332A0A1B0GUA5 103 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 M0R135 149 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 HOXD13P35453 343 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 ZNF799Q96GE5 643 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 MOGAT1Q96PD6 335 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 SORT1Q99523 831 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 M0R082 166 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 PJVKQ0ZLH3 352 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 CST9Q5W186 159 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 ABI3BPQ7Z7G0 1075 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 ZPBPQ9BS86 351 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 TIMM10BQ9Y5J6 103 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 UQCRFS1P47985 274 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 RNF212Q495C1 297 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 CALHM3Q86XJ0 350 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 HSD3B7Q9H2F3 369 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 BRWD1Q9NSI6 2320 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 GPANK1O95872 356 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 CD37P11049 281 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 TEAD1P28347 426 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 RNF167Q9H6Y7 350 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 PHRF1Q9P1Y6 1649 aaKnown RBP14.89□□□□□ -0.03
PTCH1-201ENST00000331920 TMPRSS11DO60235 418 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 POLR2IP36954 125 aaKnown RBP14.89□□□□□ -0.03
PTCH1-201ENST00000331920 FNDC7Q5VTL7 733 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 LINC00052Q96N35 136 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 ELOVL1Q9BW60 279 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 TMPRSS13Q9BYE2 586 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 IL21Q9HBE4 155 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 SCN1AP35498 2009 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 OR2T8A6NH00 312 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 CST2P09228 141 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 MAMSTRQ6ZN01 415 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 EXD3Q8N9H8 876 aa14.89□□□□□ -0.03
PTCH1-201ENST00000331920 K7ERU9 68 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 TIAL1Q01085 375 aaKnown RBP eCLIP14.88□□□□□ -0.03
PTCH1-201ENST00000331920 VWA2Q5GFL6 755 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 RGS7BPQ6MZT1 257 aaPredicted RBP14.88□□□□□ -0.03
PTCH1-201ENST00000331920 OR4S1Q8NGB4 309 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 ADAT1Q9BUB4 502 aaKnown RBP14.88□□□□□ -0.03
PTCH1-201ENST00000331920 ST3GAL6Q9Y274 331 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 A0A1W2PRD5 423 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 A0A1W2PRF3 423 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 A0A1W2PRM7 423 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 ALDOCP09972 364 aaKnown RBP14.88□□□□□ -0.03
PTCH1-201ENST00000331920 OR2A2Q6IF42 318 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 LRRC15Q8TF66 581 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 MS4A10Q96PG2 267 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 HRO43593 1189 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 MIDNQ504T8 468 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 GPR150Q8NGU9 434 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 TP53RKQ96S44 253 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 CITED2Q99967 270 aaPredicted RBP14.88□□□□□ -0.03
PTCH1-201ENST00000331920 SETD1AO15047 1707 aaKnown RBP14.88□□□□□ -0.03
PTCH1-201ENST00000331920 XRN1Q8IZH2 1706 aaKnown RBP14.88□□□□□ -0.03
PTCH1-201ENST00000331920 EMP1P54849 157 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 C16orf70Q9BSU1 422 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 HEATR1Q9H583 2144 aaKnown RBP14.88□□□□□ -0.03
PTCH1-201ENST00000331920 PRRC2BQ5JSZ5 2229 aaKnown RBP14.88□□□□□ -0.03
PTCH1-201ENST00000331920 BCL3P20749 454 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 TPBGQ13641 420 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 CLLU1OSQ5K130 101 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 UBE2FQ969M7 185 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 OR2A14Q96R47 310 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 CORINQ9Y5Q5 1042 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 NUMBLQ9Y6R0 609 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 MELTFP08582 738 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 APELAP0DMC3 54 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 CHRNA7P36544 502 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 TCTEX1D1Q8N7M0 179 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 NUDCD2Q8WVJ2 157 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 ST8SIA5O15466 376 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 ERVS71-1P61550 626 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 SEZ6L2Q6UXD5 910 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 TAS1R1Q7RTX1 841 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 CLDN23Q96B33 292 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 C8orf44Q96CB5 159 aa14.88□□□□□ -0.03
PTCH1-201ENST00000331920 RAB29O14966 203 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 NDUFB3O43676 98 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 DGCR2P98153 550 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 SMIM21Q3B7S5 101 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 OR52N4Q8NGI2 321 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms