RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 STMN2Q93045 179 aa23.18■■□□□ 1.3
ATPAF1-201ENST00000329231 GABARAPL3Q9BY60 117 aa23.18■■□□□ 1.3
ATPAF1-201ENST00000329231 C14orf119Q9NWQ9 140 aa23.18■■□□□ 1.3
ATPAF1-201ENST00000329231 ZNF319Q9P2F9 582 aa23.18■■□□□ 1.3
ATPAF1-201ENST00000329231 PPIAL4AQ9Y536 164 aa23.18■■□□□ 1.3
ATPAF1-201ENST00000329231 CUBNO60494 3623 aa23.18■■□□□ 1.3
ATPAF1-201ENST00000329231 hCG_38984A0A1B0GV85 526 aa23.17■■□□□ 1.3
ATPAF1-201ENST00000329231 SLC22A31A6NKX4 558 aa23.17■■□□□ 1.3
ATPAF1-201ENST00000329231 FAM20BO75063 409 aa23.17■■□□□ 1.3
ATPAF1-201ENST00000329231 ZFP36P26651 326 aaKnown RBP23.17■■□□□ 1.3
ATPAF1-201ENST00000329231 HCCSP53701 268 aa23.17■■□□□ 1.3
ATPAF1-201ENST00000329231 PSMA6P60900 246 aaKnown RBP23.17■■□□□ 1.3
ATPAF1-201ENST00000329231 SNCBQ16143 134 aa23.17■■□□□ 1.3
ATPAF1-201ENST00000329231 ESCO2Q56NI9 601 aa23.17■■□□□ 1.3
ATPAF1-201ENST00000329231 NXNL2Q5VZ03 156 aa23.17■■□□□ 1.3
ATPAF1-201ENST00000329231 DEGS2Q6QHC5 323 aa23.17■■□□□ 1.3
ATPAF1-201ENST00000329231 MEPCEQ7L2J0 689 aaKnown RBP23.17■■□□□ 1.3
ATPAF1-201ENST00000329231 PQLC1Q8N2U9 271 aa23.17■■□□□ 1.3
ATPAF1-201ENST00000329231 ASB17Q8WXJ9 295 aa23.17■■□□□ 1.3
ATPAF1-201ENST00000329231 DVL3Q92997 716 aaPredicted RBP23.17■■□□□ 1.3
ATPAF1-201ENST00000329231 CNN2Q99439 309 aaKnown RBP23.17■■□□□ 1.3
ATPAF1-201ENST00000329231 TMPRSS13Q9BYE2 586 aa23.17■■□□□ 1.3
ATPAF1-201ENST00000329231 METTL17Q9H7H0 456 aaPredicted RBP23.17■■□□□ 1.3
ATPAF1-201ENST00000329231 USE1Q9NZ43 259 aa23.17■■□□□ 1.3
ATPAF1-201ENST00000329231 MIOXQ9UGB7 285 aa23.17■■□□□ 1.3
ATPAF1-201ENST00000329231 LRP12Q9Y561 859 aa23.17■■□□□ 1.3
ATPAF1-201ENST00000329231 M0R129 80 aa23.16■■□□□ 1.3
ATPAF1-201ENST00000329231 EI24O14681 340 aa23.16■■□□□ 1.3
ATPAF1-201ENST00000329231 ALPLP05186 524 aa23.16■■□□□ 1.3
ATPAF1-201ENST00000329231 GSK3AP49840 483 aa23.16■■□□□ 1.3
ATPAF1-201ENST00000329231 AADACL4Q5VUY2 407 aa23.16■■□□□ 1.3
ATPAF1-201ENST00000329231 RFLNBQ8N5W9 214 aa23.16■■□□□ 1.3
ATPAF1-201ENST00000329231 CSNK2A3Q8NEV1 391 aa23.16■■□□□ 1.3
ATPAF1-201ENST00000329231 OR8S1Q8NH09 359 aa23.16■■□□□ 1.3
ATPAF1-201ENST00000329231 IL4I1Q96RQ9 567 aa23.16■■□□□ 1.3
ATPAF1-201ENST00000329231 MROQ9BYG7 248 aa23.16■■□□□ 1.3
ATPAF1-201ENST00000329231 RIBC2Q9H4K1 309 aa23.16■■□□□ 1.3
ATPAF1-201ENST00000329231 RNF7Q9UBF6 113 aa23.16■■□□□ 1.3
ATPAF1-201ENST00000329231 ZNF391Q9UJN7 358 aa23.16■■□□□ 1.3
ATPAF1-201ENST00000329231 LRCH1Q9Y2L9 728 aa23.16■■□□□ 1.3
ATPAF1-201ENST00000329231 POLR3KQ9Y2Y1 108 aaPredicted RBP23.16■■□□□ 1.3
ATPAF1-201ENST00000329231 ORC6Q9Y5N6 252 aa23.16■■□□□ 1.3
ATPAF1-201ENST00000329231 A8MXK9 166 aa23.15■■□□□ 1.3
ATPAF1-201ENST00000329231 WNT2P09544 360 aa23.15■■□□□ 1.3
ATPAF1-201ENST00000329231 RPS2P15880 293 aaKnown RBP23.15■■□□□ 1.3
ATPAF1-201ENST00000329231 ALDH3A2P51648 485 aa23.15■■□□□ 1.3
ATPAF1-201ENST00000329231 ZNF404Q494X3 552 aa23.15■■□□□ 1.3
ATPAF1-201ENST00000329231 FAM201AQ5SY85 155 aa23.15■■□□□ 1.3
ATPAF1-201ENST00000329231 BCDIN3DQ7Z5W3 292 aaKnown RBP23.15■■□□□ 1.3
ATPAF1-201ENST00000329231 GID4Q8IVV7 300 aa23.15■■□□□ 1.3
ATPAF1-201ENST00000329231 FTMTQ8N4E7 242 aa23.15■■□□□ 1.3
ATPAF1-201ENST00000329231 TMEM246Q9BRR3 403 aa23.15■■□□□ 1.3
ATPAF1-201ENST00000329231 C9orf16Q9BUW7 83 aa23.15■■□□□ 1.3
ATPAF1-201ENST00000329231 C7orf69Q9H7B7 122 aa23.15■■□□□ 1.3
ATPAF1-201ENST00000329231 FBN1P35555 2871 aaKnown RBP23.14■■□□□ 1.29
ATPAF1-201ENST00000329231 AVPP01185 164 aa23.14■■□□□ 1.29
ATPAF1-201ENST00000329231 POLR2IP36954 125 aaKnown RBP23.14■■□□□ 1.29
ATPAF1-201ENST00000329231 SEC61A1P61619 476 aaKnown RBP23.14■■□□□ 1.29
ATPAF1-201ENST00000329231 LIPNQ5VXI9 398 aa23.14■■□□□ 1.29
ATPAF1-201ENST00000329231 C1orf229Q6ZS94 237 aaPredicted RBP23.14■■□□□ 1.29
ATPAF1-201ENST00000329231 CBR4Q8N4T8 237 aa23.14■■□□□ 1.29
ATPAF1-201ENST00000329231 LOC105371242A0A075B767 164 aa23.13■■□□□ 1.29
ATPAF1-201ENST00000329231 ACOD1A6NK06 481 aa23.13■■□□□ 1.29
ATPAF1-201ENST00000329231 ZNF254O75437 659 aa23.13■■□□□ 1.29
ATPAF1-201ENST00000329231 GRPP07492 148 aa23.13■■□□□ 1.29
ATPAF1-201ENST00000329231 GNALP38405 381 aa23.13■■□□□ 1.29
ATPAF1-201ENST00000329231 ROM1Q03395 351 aa23.13■■□□□ 1.29
ATPAF1-201ENST00000329231 OR8B8Q15620 311 aa23.13■■□□□ 1.29
ATPAF1-201ENST00000329231 NLRC3Q7RTR2 1065 aa23.13■■□□□ 1.29
ATPAF1-201ENST00000329231 ZNF679Q8IYX0 411 aa23.13■■□□□ 1.29
ATPAF1-201ENST00000329231 OR8B12Q8NGG6 310 aa23.13■■□□□ 1.29
ATPAF1-201ENST00000329231 MNTQ99583 582 aa23.13■■□□□ 1.29
ATPAF1-201ENST00000329231 PAPOLGQ9BWT3 736 aaKnown RBP23.13■■□□□ 1.29
ATPAF1-201ENST00000329231 SSBP3Q9BWW4 388 aaPredicted RBP23.13■■□□□ 1.29
ATPAF1-201ENST00000329231 OR5V1Q9UGF6 321 aa23.13■■□□□ 1.29
ATPAF1-201ENST00000329231 A6NLC8 198 aa23.12■■□□□ 1.29
ATPAF1-201ENST00000329231 PSMD9O00233 223 aa23.12■■□□□ 1.29
ATPAF1-201ENST00000329231 TCF21O43680 179 aa23.12■■□□□ 1.29
ATPAF1-201ENST00000329231 BAG2O95816 211 aa23.12■■□□□ 1.29
ATPAF1-201ENST00000329231 DCTDP32321 178 aa23.12■■□□□ 1.29
ATPAF1-201ENST00000329231 DCDC5Q6ZRR9 648 aa23.12■■□□□ 1.29
ATPAF1-201ENST00000329231 C1QL2Q7Z5L3 287 aa23.12■■□□□ 1.29
ATPAF1-201ENST00000329231 OR8B3Q8NGG8 313 aa23.12■■□□□ 1.29
ATPAF1-201ENST00000329231 SPATA3Q8NHX4 192 aa23.12■■□□□ 1.29
ATPAF1-201ENST00000329231 NEIL1Q96FI4 390 aaPredicted RBP23.12■■□□□ 1.29
ATPAF1-201ENST00000329231 OR8B4Q96RC9 309 aa23.12■■□□□ 1.29
ATPAF1-201ENST00000329231 OR8B2Q96RD0 313 aa23.12■■□□□ 1.29
ATPAF1-201ENST00000329231 C1orf123Q9NWV4 160 aa23.12■■□□□ 1.29
ATPAF1-201ENST00000329231 HAO2Q9NYQ3 351 aa23.12■■□□□ 1.29
ATPAF1-201ENST00000329231 COPS3Q9UNS2 423 aa23.12■■□□□ 1.29
ATPAF1-201ENST00000329231 RHBDD3Q9Y3P4 386 aa23.12■■□□□ 1.29
ATPAF1-201ENST00000329231 WNK2Q9Y3S1 2297 aa23.12■■□□□ 1.29
ATPAF1-201ENST00000329231 COL6A5A8TX70 2615 aa23.11■■□□□ 1.29
ATPAF1-201ENST00000329231 TMEM269A0A1B0GVZ9 245 aa23.11■■□□□ 1.29
ATPAF1-201ENST00000329231 PHYHO14832 338 aa23.11■■□□□ 1.29
ATPAF1-201ENST00000329231 KCNJ8Q15842 424 aa23.11■■□□□ 1.29
ATPAF1-201ENST00000329231 SLC35F2Q8IXU6 374 aa23.11■■□□□ 1.29
ATPAF1-201ENST00000329231 NANPQ8TBE9 248 aa23.11■■□□□ 1.29
ATPAF1-201ENST00000329231 OCEL1Q9H607 264 aa23.11■■□□□ 1.29
ATPAF1-201ENST00000329231 ADGRL4Q9HBW9 690 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms