RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 CCDC85CA6NKD9 419 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 EFSO43281 561 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 VAMP5O95183 116 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 UBBP0CG47 229 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 ZP3P21754 424 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 BAMBIQ13145 260 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 OR2I1PQ8NGU4 316 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 FBXW5Q969U6 566 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 SPACA5Q96QH8 159 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 OCSTAMPQ9BR26 566 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 SDHAF2Q9NX18 166 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 A8MXK9 166 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 TLX3O43711 291 aaPredicted RBP12.13□□□□□ -0.47
ATG4C-201ENST00000317868 EIF1BO60739 113 aaKnown RBP12.13□□□□□ -0.47
ATG4C-201ENST00000317868 NAT2P11245 290 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 MGMTP16455 207 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 TAF13Q15543 124 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 ALKAL2Q6UX46 152 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 FAM57BQ71RH2 274 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 KCNRGQ8N5I3 272 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 CHST4Q8NCG5 386 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 AGBL5Q8NDL9 886 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 OR2Y1Q8NGV0 311 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 OR1S1Q8NH92 325 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 LRRC20Q8TCA0 184 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 TMEM41AQ96HV5 264 aa12.13□□□□□ -0.47
ATG4C-201ENST00000317868 GPN3Q9UHW5 284 aaPredicted RBP12.13□□□□□ -0.47
ATG4C-201ENST00000317868 A0A0D9SG52 128 aa12.12□□□□□ -0.47
ATG4C-201ENST00000317868 SOCS1O15524 211 aa12.12□□□□□ -0.47
ATG4C-201ENST00000317868 RAD51DO75771 328 aa12.12□□□□□ -0.47
ATG4C-201ENST00000317868 MLF1P58340 268 aa12.12□□□□□ -0.47
ATG4C-201ENST00000317868 C11orf87Q6NUJ2 197 aa12.12□□□□□ -0.47
ATG4C-201ENST00000317868 JMJD6Q6NYC1 403 aaPredicted RBP12.12□□□□□ -0.47
ATG4C-201ENST00000317868 BEST3Q8N1M1 668 aa12.12□□□□□ -0.47
ATG4C-201ENST00000317868 EIF4E3Q8N5X7 224 aaKnown RBP12.12□□□□□ -0.47
ATG4C-201ENST00000317868 ZIC4Q8N9L1 334 aa12.12□□□□□ -0.47
ATG4C-201ENST00000317868 MAFAQ8NHW3 353 aaPredicted RBP12.12□□□□□ -0.47
ATG4C-201ENST00000317868 SUN5Q8TC36 379 aa12.12□□□□□ -0.47
ATG4C-201ENST00000317868 ZNF385AQ96PM9 386 aaKnown RBP12.12□□□□□ -0.47
ATG4C-201ENST00000317868 IFT46Q9NQC8 304 aa12.12□□□□□ -0.47
ATG4C-201ENST00000317868 RNF222A6NCQ9 220 aa12.12□□□□□ -0.47
ATG4C-201ENST00000317868 B8ZZF3 427 aa12.12□□□□□ -0.47
ATG4C-201ENST00000317868 THBS4P35443 961 aa12.12□□□□□ -0.47
ATG4C-201ENST00000317868 CSNK1A1P48729 337 aa12.12□□□□□ -0.47
ATG4C-201ENST00000317868 ECH1Q13011 328 aa12.12□□□□□ -0.47
ATG4C-201ENST00000317868 MICBQ29980 383 aa12.12□□□□□ -0.47
ATG4C-201ENST00000317868 SLC16A14Q7RTX9 510 aa12.12□□□□□ -0.47
ATG4C-201ENST00000317868 OVCH2Q7RTZ1 564 aa12.12□□□□□ -0.47
ATG4C-201ENST00000317868 OR9K2Q8NGE7 335 aa12.12□□□□□ -0.47
ATG4C-201ENST00000317868 FAM71F1Q96KD3 344 aaPredicted RBP12.12□□□□□ -0.47
ATG4C-201ENST00000317868 GHRLQ9UBU3 117 aa12.12□□□□□ -0.47
ATG4C-201ENST00000317868 PTRH2Q9Y3E5 179 aaKnown RBP12.12□□□□□ -0.47
ATG4C-201ENST00000317868 FGF2P09038 288 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 SSR4P51571 173 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 B3GALT5-AS1P59052 145 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 ACTBL2Q562R1 376 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 PEG10Q86TG7 708 aaKnown RBP12.11□□□□□ -0.47
ATG4C-201ENST00000317868 LHFPL1Q86WI0 220 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 ZNF101Q8IZC7 436 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 ZNF283Q8N7M2 679 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 ADAD2Q8NCV1 583 aaKnown RBP12.11□□□□□ -0.47
ATG4C-201ENST00000317868 GJC3Q8NFK1 279 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 ST8SIA4Q92187 359 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 CYYR1Q96J86 154 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 TMEM59Q9BXS4 323 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 RDH8Q9NYR8 311 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 NOP16Q9Y3C1 178 aaKnown RBP12.11□□□□□ -0.47
ATG4C-201ENST00000317868 A0A1W2PP11 408 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 OR2F2O95006 317 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 DUS4LO95620 317 aaKnown RBP12.11□□□□□ -0.47
ATG4C-201ENST00000317868 CSN2P05814 226 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 KLK3P07288 261 aaPredicted RBP12.11□□□□□ -0.47
ATG4C-201ENST00000317868 CCL4P13236 92 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 RPS27AP62979 156 aaKnown RBP12.11□□□□□ -0.47
ATG4C-201ENST00000317868 UBA52P62987 128 aaKnown RBP12.11□□□□□ -0.47
ATG4C-201ENST00000317868 OR2F1Q13607 317 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 FAM189A2Q15884 450 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 ZNF546Q86UE3 836 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 ARRDC1Q8N5I2 433 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 C10orf35Q96D05 121 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 RAB3CQ96E17 227 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 GNRHR2Q96P88 292 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 TM2D1Q9BX74 207 aa12.11□□□□□ -0.47
ATG4C-201ENST00000317868 DNPH1O43598 174 aa12.1□□□□□ -0.47
ATG4C-201ENST00000317868 DHRS3O75911 302 aa12.1□□□□□ -0.47
ATG4C-201ENST00000317868 HPP00738 406 aa12.1□□□□□ -0.47
ATG4C-201ENST00000317868 RLN2P04090 185 aa12.1□□□□□ -0.47
ATG4C-201ENST00000317868 C20orf196Q8IYI0 205 aa12.1□□□□□ -0.47
ATG4C-201ENST00000317868 MAML2Q8IZL2 1156 aaPredicted RBP12.1□□□□□ -0.47
ATG4C-201ENST00000317868 CCDC54Q8NEL0 328 aa12.1□□□□□ -0.47
ATG4C-201ENST00000317868 TMEM185AQ8NFB2 350 aa12.1□□□□□ -0.47
ATG4C-201ENST00000317868 OR56B1Q8NGI3 324 aa12.1□□□□□ -0.47
ATG4C-201ENST00000317868 OR4K15Q8NH41 348 aa12.1□□□□□ -0.47
ATG4C-201ENST00000317868 MR1Q95460 341 aa12.1□□□□□ -0.47
ATG4C-201ENST00000317868 INTS12Q96CB8 462 aaKnown RBP12.1□□□□□ -0.47
ATG4C-201ENST00000317868 UCN2Q96RP3 112 aa12.1□□□□□ -0.47
ATG4C-201ENST00000317868 CHST5Q9GZS9 411 aa12.1□□□□□ -0.47
ATG4C-201ENST00000317868 WDR13Q9H1Z4 485 aa12.1□□□□□ -0.47
ATG4C-201ENST00000317868 KMT2EQ8IZD2 1858 aa12.1□□□□□ -0.47
ATG4C-201ENST00000317868 ZSCAN5BA6NJL1 495 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms