RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 PTGER4P35408 488 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 PPP1CBP62140 327 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 HAGHQ16775 308 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 COMTD1Q86VU5 262 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 MTURNQ8N3F0 131 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 ACY3Q96HD9 319 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 DIRC2Q96SL1 478 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 WNK1Q9H4A3 2382 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 ARGFXA6NJG6 315 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 CLDN34H7C241 214 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 CSRP3P50461 194 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 EBPQ15125 230 aaKnown RBP7.97□□□□□ -1.13
COL6A5-202ENST00000312481 MRGPREQ86SM8 312 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 SIGLECL1Q8N7X8 197 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 COX14Q96I36 57 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 S1PR3Q99500 378 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 UTP23Q9BRU9 249 aaKnown RBP7.97□□□□□ -1.13
COL6A5-202ENST00000312481 AK3Q9UIJ7 227 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 PCOLCE2Q9UKZ9 415 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 ZNF346Q9UL40 294 aaKnown RBP7.97□□□□□ -1.13
COL6A5-202ENST00000312481 PIGLQ9Y2B2 252 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 TNFRSF1BP20333 461 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 PPP1CAP62136 330 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 FDX2Q6P4F2 183 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 SLC35E3Q7Z769 313 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 FRZBQ92765 325 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 CEBPZOSA8MTT3 80 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 AP4M1O00189 453 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 SNCGO76070 127 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 CT45A10P0DMU9 189 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 EN2P19622 333 aaPredicted RBP7.97□□□□□ -1.13
COL6A5-202ENST00000312481 GJA4P35212 333 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 RGRP47804 291 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 SUCLG1P53597 346 aaKnown RBP7.97□□□□□ -1.13
COL6A5-202ENST00000312481 ERVS71-1P61550 626 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 GLIPR1L1Q6UWM5 242 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 H2BFWTQ7Z2G1 175 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 IL22RA1Q8N6P7 574 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 OR4C16Q8NGL9 310 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 P2RX4Q99571 388 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 PAAF1Q9BRP4 392 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 CFHR5Q9BXR6 569 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 TRBV9A0A0B4J1U6 114 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 FAM90A26D6RGX4 464 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 M0R082 166 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 PPP6CO00743 305 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 PTBP3O95758 552 aaKnown RBP7.97□□□□□ -1.13
COL6A5-202ENST00000312481 ISG15P05161 165 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 MELTFP08582 738 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 ERGP11308 486 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 DHRS2Q13268 280 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 GPNMBQ14956 572 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 TMEM211Q6ICI0 200 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 NDFIP1Q9BT67 221 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 OPN4Q9UHM6 478 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 HCRTO43612 131 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 OR7C1O76099 320 aaPredicted RBP7.97□□□□□ -1.13
COL6A5-202ENST00000312481 HRASP01112 189 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 RPL35P42766 123 aaKnown RBP7.97□□□□□ -1.13
COL6A5-202ENST00000312481 HTR5AP47898 357 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 ADPRHP54922 357 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 SHBQ15464 509 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 DMKNQ6E0U4 476 aaPredicted RBP7.97□□□□□ -1.13
COL6A5-202ENST00000312481 CMTM4Q8IZR5 234 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 INSM2Q96T92 566 aaPredicted RBP7.97□□□□□ -1.13
COL6A5-202ENST00000312481 C19orf24Q9BVV8 132 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 NRASP01111 189 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 FUT3P21217 361 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 MMP16P51512 607 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 FAM3AP98173 230 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 KIAA0141Q14154 515 aaPredicted RBP7.97□□□□□ -1.13
COL6A5-202ENST00000312481 MMP25Q9NPA2 562 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 OR51B4Q9Y5P0 310 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 B3GALT1Q9Y5Z6 326 aa7.97□□□□□ -1.13
COL6A5-202ENST00000312481 M0R135 149 aa7.96□□□□□ -1.13
COL6A5-202ENST00000312481 PHF1O43189 567 aaPredicted RBP7.96□□□□□ -1.13
COL6A5-202ENST00000312481 ZNF799Q96GE5 643 aa7.96□□□□□ -1.13
COL6A5-202ENST00000312481 ST6GAL2Q96JF0 529 aa7.96□□□□□ -1.13
COL6A5-202ENST00000312481 ELF5Q9UKW6 265 aaPredicted RBP7.96□□□□□ -1.13
COL6A5-202ENST00000312481 A0A0U1RQV5 110 aa7.96□□□□□ -1.13
COL6A5-202ENST00000312481 CBR3O75828 277 aa7.96□□□□□ -1.13
COL6A5-202ENST00000312481 CPEB2Q7Z5Q1 589 aaKnown RBP7.96□□□□□ -1.13
COL6A5-202ENST00000312481 BVESQ8NE79 360 aa7.96□□□□□ -1.13
COL6A5-202ENST00000312481 NFAM1Q8NET5 270 aaPredicted RBP7.96□□□□□ -1.13
COL6A5-202ENST00000312481 OR6X1Q8NH79 312 aa7.96□□□□□ -1.13
COL6A5-202ENST00000312481 SLAMF6Q96DU3 332 aa7.96□□□□□ -1.13
COL6A5-202ENST00000312481 Q96M85 177 aa7.96□□□□□ -1.13
COL6A5-202ENST00000312481 A0A1W2PPK0 400 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 AKR7A2O43488 359 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 CTSDP07339 412 aaPredicted RBP7.96□□□□□ -1.14
COL6A5-202ENST00000312481 SERPINA2P20848 420 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 FASLGP48023 281 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 SULT1A2P50226 295 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 SNU13P55769 128 aaKnown RBP7.96□□□□□ -1.14
COL6A5-202ENST00000312481 WNT3P56703 355 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 UBALD2Q8IYN6 164 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 CMTM2Q8TAZ6 248 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 PITPNC1Q9UKF7 332 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 ZNF860A6NHJ4 632 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 SCGB1D1O95968 90 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms